RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PCBP1Q15365 356 aaKnown RBP eCLIP8.25□□□□□ -1.09
NIPBL-203ENST00000503274 VASNQ6EMK4 673 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 FSTL4Q6MZW2 842 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 PKN3Q6P5Z2 889 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 TMC5Q6UXY8 1006 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 PROSER1Q86XN7 944 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 TTLL6Q8N841 843 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 TMEM209Q96SK2 561 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 KCNH7Q9NS40 1196 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 RBPJLQ9UBG7 517 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 WASF3Q9UPY6 502 aa8.25□□□□□ -1.09
NIPBL-203ENST00000503274 EIF4G1Q04637 1599 aaKnown RBP8.25□□□□□ -1.09
NIPBL-203ENST00000503274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-203ENST00000503274 PRAMEF25A6NGN4 478 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 KRT37O76014 449 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 ENO2P09104 434 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-203ENST00000503274 CFPP27918 469 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
NIPBL-203ENST00000503274 SEC23AQ15436 765 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 CD276Q5ZPR3 534 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 LRRC56Q8IYG6 542 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-203ENST00000503274 DLG3Q92796 817 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 MAPRE3Q9UPY8 281 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 B3GALT1Q9Y5Z6 326 aa8.24□□□□□ -1.09
NIPBL-203ENST00000503274 MASP1P48740 699 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 HERVK_113P62684 666 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 DBPQ10586 325 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-203ENST00000503274 ADAM9Q13443 819 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 TCERG1LQ5VWI1 586 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 LIPIQ6XZB0 460 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 SAPCD2Q86UD0 394 aa8.23□□□□□ -1.09
NIPBL-203ENST00000503274 ZSCAN18Q8TBC5 510 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-203ENST00000503274 F2P00734 622 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 PFKPQ01813 784 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 VWA3BQ502W6 1294 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 THNSL2Q86YJ6 484 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 DTX3Q8N9I9 347 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 CLIC6Q96NY7 704 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 DLL4Q9NR61 685 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 IFT57Q9NWB7 429 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 SPATA6Q9NWH7 488 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-203ENST00000503274 PRKAB1Q9Y478 270 aa8.22□□□□□ -1.09
NIPBL-203ENST00000503274 ZNF839A8K0R7 811 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 H7C1D1 291 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 GAS7O60861 476 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 THBS2P35442 1172 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 SCNN1BP51168 640 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 DLX2Q07687 328 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-203ENST00000503274 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
NIPBL-203ENST00000503274 CC2D1AQ6P1N0 951 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-203ENST00000503274 TTLL7Q6ZT98 887 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 NXPE1Q8N323 547 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 ZNF526Q8TF50 670 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-203ENST00000503274 LEO1Q8WVC0 666 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-203ENST00000503274 TMX1Q9H3N1 280 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 ARHGAP28Q9P2N2 729 aa8.21□□□□□ -1.1
NIPBL-203ENST00000503274 FFAR3O14843 346 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 FOXP2O15409 715 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 AOAHP28039 575 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SDHAP31040 664 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 KIF11P52732 1056 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 ZNF174Q15697 407 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SKIDA1Q1XH10 827 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 VMACQ2NL98 169 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SKOR2Q2VWA4 1001 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-203ENST00000503274 RNF180Q86T96 592 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 LINC01356Q8N9X3 169 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 IGDCC4Q8TDY8 1250 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 WRNIP1Q96S55 665 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 CAAP1Q9H8G2 361 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SLC39A2Q9NP94 309 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
NIPBL-203ENST00000503274 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 ZNF891A8MT65 544 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-203ENST00000503274 DVL2O14641 736 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 CYP7B1O75881 506 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 MMEP08473 750 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 ATP2A2P16615 1042 aaKnown RBP8.19□□□□□ -1.1
NIPBL-203ENST00000503274 STAT3P40763 770 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 DSG1Q02413 1049 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 SART3Q15020 963 aaKnown RBP8.19□□□□□ -1.1
NIPBL-203ENST00000503274 OR2W6PQ8NHA6 318 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 PCIF1Q9H4Z3 704 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 ACSS2Q9NR19 701 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 NTMQ9P121 344 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 CROTQ9UKG9 612 aa8.19□□□□□ -1.1
NIPBL-203ENST00000503274 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.19□□□□□ -1.1
NIPBL-203ENST00000503274 PTGS1P23219 599 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 RPL13P26373 211 aaKnown RBP8.18□□□□□ -1.1
NIPBL-203ENST00000503274 SOX5P35711 763 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 RTP5Q14D33 572 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 CATSPEREQ5SY80 951 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
NIPBL-203ENST00000503274 ASB15Q8WXK1 588 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms