RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZNF526Q8TF50 670 aaPredicted RBP4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 DCAF4Q8WV16 495 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 RELTQ969Z4 430 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 ORAI3Q9BRQ5 295 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 PHF20Q9BVI0 1012 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 AP5M1Q9H0R1 490 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 TMX1Q9H3N1 280 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 GPR27Q9NS67 375 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 MAGEC2Q9UBF1 373 aaPredicted RBP4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 NDOR1Q9UHB4 597 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 HFM1A2PYH4 1435 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 NUP155O75694 1391 aa4.02□□□□□ -1.77
CDC42SE2-205ENST00000502840 EFCAB14O75071 495 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 EYA4O95677 639 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 CRTAMO95727 393 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 NCLP19338 710 aaKnown RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 KCNC1P48547 511 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 CDKN1CP49918 316 aaPredicted RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 GPR85P60893 370 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 RNF187Q5TA31 235 aaPredicted RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 CREB3L3Q68CJ9 461 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 LBX2Q6XYB7 198 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 ETV3LQ6ZN32 361 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 STRA8Q7Z7C7 330 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZDHHC14Q8IZN3 488 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 LINC00482Q8N8I6 264 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 PCDH19Q8TAB3 1148 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 CXorf38Q8TB03 319 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 DDX1Q92499 740 aaKnown RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 DDX11Q96FC9 970 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZFYVE21Q9BQ24 234 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 SYT3Q9BQG1 590 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 SPATA25Q9BR10 227 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 ADAM7Q9H2U9 754 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 SPATA6Q9NWH7 488 aaPredicted RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 PPARGC1AQ9UBK2 798 aaKnown RBP4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 MAPRE3Q9UPY8 281 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZNF652Q9Y2D9 606 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 CCDC7Q96M83 1385 aa4.01□□□□□ -1.77
CDC42SE2-205ENST00000502840 KIF7Q2M1P5 1343 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 ERCC6Q03468 1493 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 ST20-MTHFSA0A0A6YYL1 179 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 H7BY64 318 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 AQP7O14520 342 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 MYO1BO43795 1136 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 FOXD2O60548 495 aaPredicted RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 ASLP04424 464 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 CYP2C8P10632 490 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 MYCLP1P12525 358 aaPredicted RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 MECP2P51608 486 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 LSAMPQ13449 338 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PCBP1Q15365 356 aaKnown RBP eCLIP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 HABP4Q5JVS0 413 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 CC2D1BQ5T0F9 858 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PKN3Q6P5Z2 889 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 FRMD5Q7Z6J6 570 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 FAM126BQ8IXS8 530 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 CARFQ8N187 725 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 FAM26EQ8N5C1 309 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZBTB8AQ96BR9 441 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 TRMT2BQ96GJ1 504 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 TMEM169Q96HH4 297 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 TEPSINQ96N21 525 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 GORASP1Q9BQQ3 440 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PALD1Q9ULE6 856 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 NOP58Q9Y2X3 529 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PCDHA9Q9Y5H5 950 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PCDHA2Q9Y5H9 948 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PRG4Q92954 1404 aaPredicted RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 ANKRD30AQ9BXX3 1397 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 CDK13Q14004 1512 aaKnown RBP4□□□□□ -1.77
CDC42SE2-205ENST00000502840 CUL7Q14999 1698 aa4□□□□□ -1.77
CDC42SE2-205ENST00000502840 PTPN23Q9H3S7 1636 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 GRIN2BQ13224 1484 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 PRDM2Q13029 1718 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 SUPT6HQ7KZ85 1726 aaKnown RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 GLRX3O76003 335 aaKnown RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 SKOR2Q2VWA4 1001 aaPredicted RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 EMC4Q5J8M3 183 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 NT5DC1Q5TFE4 455 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 ERICH6BQ5W0A0 696 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 FSTL4Q6MZW2 842 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 ZCCHC8Q6NZY4 707 aaKnown RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 LHFPL2Q6ZUX7 228 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 MILR1Q7Z6M3 343 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 ANKRD13AQ8IZ07 590 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 C11orf84Q9BUA3 381 aaPredicted RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 CAAP1Q9H8G2 361 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 PCDHA8Q9Y5H6 950 aa3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 EPRSP07814 1512 aaKnown RBP3.99□□□□□ -1.77
CDC42SE2-205ENST00000502840 LAMC3Q9Y6N6 1575 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 DAPK1P53355 1430 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 CNTLNQ9NXG0 1405 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 CFAP43Q8NDM7 1665 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 TADA3O75528 432 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 APPP05067 770 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 HSP90B1P14625 803 aaKnown RBP3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 BPIP17213 487 aa3.98□□□□□ -1.77
CDC42SE2-205ENST00000502840 SYN1P17600 705 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms