RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MMGT1Q8N4V1 131 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 PRMT6Q96LA8 375 aaPredicted RBP18.24■□□□□ 0.51
VCAN-204ENST00000502527 OSBPL9Q96SU4 736 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 AIPL1Q9NZN9 384 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 ARMCX3Q9UH62 379 aaPredicted RBP18.24■□□□□ 0.51
VCAN-204ENST00000502527 TSKSQ9UJT2 592 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 HDAC9Q9UKV0 1011 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 SCN9AQ15858 1988 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 PDXKO00764 312 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.23■□□□□ 0.51
VCAN-204ENST00000502527 ARHGEF10LQ9HCE6 1279 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 TMOD2Q9NZR1 351 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 ADAM21Q9UKJ8 722 aa18.23■□□□□ 0.51
VCAN-204ENST00000502527 LRRIQ3A6PVS8 624 aaPredicted RBP18.22■□□□□ 0.51
VCAN-204ENST00000502527 EYA4O95677 639 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 STAT2P52630 851 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 C2orf54Q08AI8 447 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 RAPGEF1Q13905 1077 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 RRP1BQ14684 758 aaKnown RBP18.22■□□□□ 0.51
VCAN-204ENST00000502527 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 COG1Q8WTW3 980 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 RUBCNQ92622 972 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
VCAN-204ENST00000502527 MED4Q9NPJ6 270 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 PSD3Q9NYI0 1048 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 SALL4Q9UJQ4 1053 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 TBCAO75347 108 aaKnown RBP18.22■□□□□ 0.51
VCAN-204ENST00000502527 NAP1L1P55209 391 aaKnown RBP18.22■□□□□ 0.51
VCAN-204ENST00000502527 ASIC2Q16515 512 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 SLC18A3Q16572 532 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 BMT2Q1RMZ1 405 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 CCDC181Q5TID7 509 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 SPICE1Q8N0Z3 855 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 FAM71BQ8TC56 605 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 GANQ9H2C0 597 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 RABGAP1Q9Y3P9 1069 aa18.22■□□□□ 0.51
VCAN-204ENST00000502527 AFPP02771 609 aaKnown RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 RPL13P26373 211 aaKnown RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 CHRNA5P30532 468 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 HOXD13P35453 343 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 TNNT3P45378 269 aaPredicted RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 CYP4A11Q02928 519 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 KLHL30Q0D2K2 578 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 NFRKBQ6P4R8 1299 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 CCNI2Q6ZMN8 369 aaPredicted RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 SPATA4Q8NEY3 305 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 CYP2W1Q8TAV3 490 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 CCDC102AQ96A19 550 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 PLCB1Q9NQ66 1216 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 VPS18Q9P253 973 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 PRPF6O94906 941 aaKnown RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 MYBP10242 640 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 GAP43P17677 238 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 PAFAH1B1P43034 410 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 METTL14Q9HCE5 456 aaKnown RBP18.21■□□□□ 0.51
VCAN-204ENST00000502527 GOPCQ9HD26 462 aa18.21■□□□□ 0.51
VCAN-204ENST00000502527 SLX4Q8IY92 1834 aa18.21■□□□□ 0.5
VCAN-204ENST00000502527 ZNF646O15015 1829 aaPredicted RBP18.2■□□□□ 0.5
VCAN-204ENST00000502527 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 BUB1O43683 1085 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
VCAN-204ENST00000502527 XRCC5P13010 732 aaKnown RBP18.2■□□□□ 0.5
VCAN-204ENST00000502527 GYS2P54840 703 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 APBA1Q02410 837 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 NAB2Q15742 525 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 KLHDC7AQ5VTJ3 777 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.2■□□□□ 0.5
VCAN-204ENST00000502527 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 TLR10Q9BXR5 811 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 TUFT1Q9NNX1 390 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 RNF14Q9UBS8 474 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
VCAN-204ENST00000502527 EML1O00423 815 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 SLC16A3O15427 465 aaKnown RBP18.19■□□□□ 0.5
VCAN-204ENST00000502527 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 AARSP49588 968 aaKnown RBP eCLIP18.19■□□□□ 0.5
VCAN-204ENST00000502527 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 BZW2Q9Y6E2 419 aaKnown RBP18.19■□□□□ 0.5
VCAN-204ENST00000502527 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
VCAN-204ENST00000502527 ZMYND10O75800 440 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 GCNT3O95395 438 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 NR3C1P04150 777 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 EPB41P11171 864 aaKnown RBP18.19■□□□□ 0.5
VCAN-204ENST00000502527 ECE1P42892 770 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 ARID5AQ03989 594 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 EXOC3L4Q17RC7 722 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 EHMT1Q9H9B1 1298 aa18.19■□□□□ 0.5
VCAN-204ENST00000502527 RGL1Q9NZL6 768 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms