RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CNGA3Q16281 694 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TMEM95Q3KNT9 176 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 GNPTABQ3T906 1256 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 RABL6Q3YEC7 729 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 KBTBD12Q3ZCT8 623 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TTC31Q49AM3 519 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ANO1Q5XXA6 986 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 IRGCQ6NXR0 463 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 OLFML1Q6UWY5 402 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 NLRC3Q7RTR2 1065 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ARMC9Q7Z3E5 817 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 PPFIBP1Q86W92 1011 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 PDCL2Q8N4E4 241 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ANKRD49Q8WVL7 239 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 NELL1Q92832 810 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 HRASLS5Q96KN8 279 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ADAMTS10Q9H324 1103 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 PRKRIP1Q9H875 184 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 KANSL2Q9H9L4 492 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TAGLN3Q9UI15 199 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SLC30A1Q9Y6M5 507 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 IQCA1LA6NCM1 817 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 B2RBV5 119 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 hCG_1984214I3L0E3 225 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 FOXN3O00409 490 aaPredicted RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CPLX1O14810 134 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 AKR1B10O60218 316 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 NEBLO76041 1014 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 GYS1P13807 737 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 MNAT1P51948 309 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 MRPL28Q13084 256 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 NOLC1Q14978 699 aaKnown RBP eCLIP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SART3Q15020 963 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 TERF2Q15554 542 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 MUM1L1Q5H9M0 696 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC122Q5T0U0 273 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CRTC3Q6UUV7 619 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SRLQ86TD4 932 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 JAMLQ86YT9 394 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SIRT2Q8IXJ6 389 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 ATP11CQ8NB49 1132 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SUN5Q8TC36 379 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 NEK1Q96PY6 1258 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 MKRN2Q9H000 416 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 DUSP15Q9H1R2 295 aaPredicted RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC68Q9H2F9 335 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 TMEM165Q9HC07 324 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 KCNQ5Q9NR82 932 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SEMA3GQ9NS98 782 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 FBXO2Q9UK22 296 aaPredicted RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 TPCN1Q9ULQ1 816 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 PPP2R3BQ9Y5P8 575 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SQORQ9Y6N5 450 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 RNF123Q5XPI4 1314 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 PITPNM2Q9BZ72 1349 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 PRR36Q9H6K5 1346 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 LTBP3Q9NS15 1303 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 A0A0B4J203 849 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 GOLGA6L10A0A0M3HER8 536 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 TBKBP1A7MCY6 615 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 STXBP3O00186 592 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SCGB1D2O95969 90 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 HSPA1AP0DMV8 641 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 HSPA1BP0DMV9 641 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SRGNP10124 158 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 GBP1P32455 592 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CDKN1CP49918 316 aaPredicted RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 KIF11P52732 1056 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 EXOSC10Q01780 885 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 NUCB1Q02818 461 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 GRIK3Q13003 919 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 IQCB1Q15051 598 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 RASA2Q15283 850 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 HS1BP3Q53T59 392 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 BRDTQ58F21 947 aaPredicted RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM133BQ5BKY9 247 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SPDYCQ5MJ68 293 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 C10orf76Q5T2E6 689 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 FIP1L1Q6UN15 594 aaKnown RBP3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 UNC5DQ6UXZ4 953 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 RASGRP2Q7LDG7 609 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC186Q7Z3E2 898 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 CKAP2LQ8IYA6 745 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 LILRB2Q8N423 598 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 ANKRD42Q8N9B4 389 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 MFSD2AQ8NA29 543 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 ERMNQ8TAM6 284 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 GOLGA5Q8TBA6 731 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 KCNN1Q92952 543 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 NKD1Q969G9 470 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 SH3KBP1Q96B97 665 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 KREMEN1Q96MU8 473 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM167BQ9BTA0 163 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 RIC8AQ9NPQ8 531 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 INCENPQ9NQS7 918 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 LMCD1Q9NZU5 365 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 DKK3Q9UBP4 350 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 ADGRE2Q9UHX3 823 aa3.5□□□□□ -1.85
SNRNP48-202ENST00000496946 PCDHA11Q9Y5I1 949 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms