RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
CXCL12-208ENST00000496375 MAFGO15525 162 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 ZBTB43O43298 467 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 CHRNA1P02708 482 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
CXCL12-208ENST00000496375 TOB2Q14106 344 aaPredicted RBP16.43■□□□□ 0.22
CXCL12-208ENST00000496375 GRIK4Q16099 956 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 TAF2Q6P1X5 1199 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 BRWD1Q9NSI6 2320 aa16.43■□□□□ 0.22
CXCL12-208ENST00000496375 GHRP10912 638 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 MGAT3Q09327 533 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 FUT2Q10981 343 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 RSPH3Q86UC2 560 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 BRF1Q92994 677 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 PGBD1Q96JS3 809 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 MXRA8Q9BRK3 442 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 JPH1Q9HDC5 661 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-208ENST00000496375 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
CXCL12-208ENST00000496375 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-208ENST00000496375 KLF18A0A0U1RQI7 1052 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 MBLAC1A4D2B0 266 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-208ENST00000496375 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 STXBP3O00186 592 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 ADCY7P51828 1080 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 IGBP1P78318 339 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 MARCH8Q5T0T0 291 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 CYP2W1Q8TAV3 490 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 DNAJB3Q8WWF6 145 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 SAMD11Q96NU1 681 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 PCYT2Q99447 389 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 UPF3BQ9BZI7 483 aaKnown RBP16.41■□□□□ 0.22
CXCL12-208ENST00000496375 KCNH7Q9NS40 1196 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-208ENST00000496375 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 NLRC5Q86WI3 1866 aa16.41■□□□□ 0.22
CXCL12-208ENST00000496375 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-208ENST00000496375 ARP10275 920 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 LPIN1Q14693 890 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 TEX2Q8IWB9 1127 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 ZBTB10Q96DT7 871 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 KIF2CQ99661 725 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 ANO3Q9BYT9 981 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 NFASCO94856 1347 aa16.4■□□□□ 0.22
CXCL12-208ENST00000496375 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 RRN3P2A6NIE6 340 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 hCG_1984214I3L0E3 225 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 INSRRP14616 1297 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 COL9A1P20849 921 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 CDC27P30260 824 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 ACTR2P61160 394 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 FGD1P98174 961 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 PTPROQ16827 1216 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 CEP55Q53EZ4 464 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 MRPL38Q96DV4 380 aaKnown RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 ZNF274Q96GC6 653 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 UBE2ZQ9H832 354 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 AGO4Q9HCK5 861 aaKnown RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 PDRG1Q9NUG6 133 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 TMEM260Q9NX78 707 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 NAP1L2Q9ULW6 460 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-208ENST00000496375 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 RALGAPA2Q2PPJ7 1873 aa16.39■□□□□ 0.21
CXCL12-208ENST00000496375 H3BNC9 293 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
CXCL12-208ENST00000496375 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-208ENST00000496375 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 GPM6BQ13491 265 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 FBXO47Q5MNV8 452 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 FIBCD1Q8N539 461 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 C22orf23Q9BZE7 217 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 GLT8D2Q9H1C3 349 aa16.38■□□□□ 0.21
CXCL12-208ENST00000496375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 CCDC196A0A1B0GTZ2 297 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 MEIS1O00470 390 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 ENPP3O14638 875 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 RPLP2P05387 115 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 ZNF76P36508 570 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 SREBF1P36956 1147 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 STAT5BP51692 787 aa16.37■□□□□ 0.21
CXCL12-208ENST00000496375 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
CXCL12-208ENST00000496375 PLCB4Q15147 1175 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms