RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 HOXB8P17481 243 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-219ENST00000495172 MTHFRP42898 656 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 MTX1Q13505 466 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 TMC5Q6UXY8 1006 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 RUFY4Q6ZNE9 571 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 THNSL1Q8IYQ7 743 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 GMCL1P1Q8NEA9 526 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 ADAM32Q8TC27 787 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 TBC1D5Q92609 795 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 EAF2Q96CJ1 260 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-219ENST00000495172 NECTIN4Q96NY8 510 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 RNPEPQ9H4A4 650 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 BCAS3Q9H6U6 928 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 RXFP3Q9NSD7 469 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SETD4Q9NVD3 440 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 LOXHD1Q8IVV2 1947 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-219ENST00000495172 OS9Q13438 667 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-219ENST00000495172 HSDL1Q3SXM5 330 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 PJA1Q8NG27 643 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 RASGRP4Q8TDF6 673 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 MAP4K1Q92918 833 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 KATNAL1Q9BW62 490 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 PRKRIP1Q9H875 184 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-219ENST00000495172 AGO3Q9H9G7 860 aaKnown RBP10.55□□□□□ -0.72
GARNL3-219ENST00000495172 MTMR4Q9NYA4 1195 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 GMEB2Q9UKD1 530 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 TELO2Q9Y4R8 837 aa10.55□□□□□ -0.72
GARNL3-219ENST00000495172 LAMTOR5O43504 91 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 CLASP2O75122 1294 aaKnown RBP10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ICAM1P05362 532 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 EPCAMP16422 314 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 CD52P31358 61 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 CA8P35219 290 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ATP8B2P98198 1209 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ITIH3Q06033 890 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 FOXC1Q12948 553 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 PRR23CQ6ZRP0 262 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 FAM160B2Q86V87 743 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 RPAP2Q8IXW5 612 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-219ENST00000495172 COLGALT1Q8NBJ5 622 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ZBTB44Q8NCP5 570 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ZCCHC14Q8WYQ9 949 aaKnown RBP10.54□□□□□ -0.72
GARNL3-219ENST00000495172 CASP10Q92851 521 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 MKL1Q969V6 931 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ZBTB10Q96DT7 871 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-219ENST00000495172 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 SEMA4GQ9NTN9 838 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 WNT16Q9UBV4 365 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
GARNL3-219ENST00000495172 PCDHGA2Q9Y5H1 932 aa10.54□□□□□ -0.72
GARNL3-219ENST00000495172 DOCK5Q9H7D0 1870 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 MINDY4BA8MYZ0 360 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 GOLIM4O00461 696 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 GIPC1O14908 333 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 LILRB5O75023 590 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 CD72P21854 359 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 HOXC8P31273 242 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 SLC1A4P43007 532 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 AUTS2Q8WXX7 1259 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 TAAR1Q96RJ0 339 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 EHMT1Q9H9B1 1298 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
GARNL3-219ENST00000495172 TBKBP1A7MCY6 615 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 TM4SF5O14894 197 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 BCAR3O75815 825 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 PRB1P04280 392 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 FDX1P10109 184 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 UBE3AQ05086 875 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 MGAT3Q09327 533 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 IL31Q6EBC2 164 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 TRIM50Q86XT4 487 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 NPAS4Q8IUM7 802 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 SLC44A3Q8N4M1 653 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 PPTC7Q8NI37 304 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 GATA6Q92908 595 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 GPKOWQ92917 476 aaPredicted RBP eCLIP10.52□□□□□ -0.73
GARNL3-219ENST00000495172 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
GARNL3-219ENST00000495172 BCL11AQ9H165 835 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
GARNL3-219ENST00000495172 TYW1Q9NV66 732 aaKnown RBP10.52□□□□□ -0.73
GARNL3-219ENST00000495172 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
GARNL3-219ENST00000495172 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms