RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HHIPL2Q6UWX4 724 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 OVCH1Q7RTY7 1134 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 SAPCD2Q86UD0 394 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 OSTM1Q86WC4 334 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 KIF18BQ86Y91 864 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 LGI4Q8N135 537 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 LINC00482Q8N8I6 264 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 CHST14Q8NCH0 376 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 IGDCC4Q8TDY8 1250 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 FNIP1Q8TF40 1166 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 DDX1Q92499 740 aaKnown RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 DACT3Q96B18 629 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 WNK4Q96J92 1243 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 C11orf84Q9BUA3 381 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 TARS2Q9BW92 718 aaKnown RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 TMEM168Q9H0V1 697 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 KCNK12Q9HB15 430 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 MSL2Q9HCI7 577 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 ARHGAP20Q9P2F6 1191 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 ZNF561-AS1K7EIQ3 104 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 PDE8AO60658 829 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 KPNA6O60684 536 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 GLRX3O76003 335 aaKnown RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 C8BP07358 591 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 POU3F2P20265 443 aaPredicted RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CFPP27918 469 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 THBS2P35442 1172 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 MC3RP41968 323 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 STAT5AP42229 794 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 FNTBP49356 437 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 SCNN1BP51168 640 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ITGA1P56199 1179 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 JAM2P57087 298 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 IRF9Q00978 393 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ADCY1Q08828 1119 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ZMAT1Q5H9K5 638 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CD276Q5ZPR3 534 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CDCA2Q69YH5 1023 aaPredicted RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 TRMT10BQ6PF06 316 aaKnown RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CXXC5Q7LFL8 322 aaKnown RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 PTRH1Q86Y79 214 aaKnown RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 REXO1L1PQ8IX06 675 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ANKRD13AQ8IZ07 590 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CARFQ8N187 725 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ARRDC4Q8NCT1 418 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 HIPK4Q8NE63 616 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 OR2W6PQ8NHA6 318 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 RPGRQ92834 1020 aaKnown RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 BORCS6Q96GS4 357 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 LCORQ96JN0 433 aaPredicted RBP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CD244Q9BZW8 370 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 BCAS3Q9H6U6 928 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 SMURF1Q9HCE7 757 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 IFT57Q9NWB7 429 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 CROTQ9UKG9 612 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 SYNPO2Q9UMS6 1093 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.33□□□□□ -1.88
LMNB1-207ENST00000494185 MAPRE3Q9UPY8 281 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 ASB1Q9Y576 335 aa3.33□□□□□ -1.88
LMNB1-207ENST00000494185 A0A087X0B3 334 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 ST20-MTHFSA0A0A6YYL1 179 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 TCRBV5S4A2TA0A5A2 114 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 ANKRD62A6NC57 917 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 H0Y858 1186 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 CBX4O00257 560 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 MAN2B1O00754 1011 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SCDO00767 359 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 PPM1GO15355 546 aaPredicted RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 FOXP2O15409 715 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 AMY2AP04746 511 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 ATF2P15336 505 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 AMY2BP19961 511 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 PTGS1P23219 599 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 MASP1P48740 699 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SESN2P58004 480 aaPredicted RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 HTRA3P83110 453 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 ROM1Q03395 351 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 GRIN1Q05586 938 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SMAD4Q13485 552 aaKnown RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 TIGD7Q6NT04 549 aaPredicted RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 PKN3Q6P5Z2 889 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 RALYLQ86SE5 291 aaKnown RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 RBM12BQ8IXT5 1001 aaKnown RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 C7orf31Q8N865 590 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SH3RF2Q8TEC5 729 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 CHAC2Q8WUX2 184 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 CLEC4DQ8WXI8 215 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 GORASP1Q9BQQ3 440 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 ORAI3Q9BRQ5 295 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SPC25Q9HBM1 224 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 USP36Q9P275 1121 aaKnown RBP3.32□□□□□ -1.88
LMNB1-207ENST00000494185 KCNG1Q9UIX4 513 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 SBNO2Q9Y2G9 1366 aa3.32□□□□□ -1.88
LMNB1-207ENST00000494185 PTPDC1A2A3K4 754 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 ZNF839A8K0R7 811 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 GSG1L2A8MUP6 293 aa3.31□□□□□ -1.88
LMNB1-207ENST00000494185 KCNK3O14649 394 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms