RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	MYH15	Q9Y2K3	1946 aa		11.27	□□□□□ -0.61
MACF1-222	ENST00000494012	C17orf102	A2RUQ5	167 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	CHMP2A	O43633	222 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	SMIM10L2A	P0DMW4	78 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	SMIM10L2B	P0DMW5	78 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	RAG1	P15918	1043 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	SYN1	P17600	705 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	ATP2B1	P20020	1258 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	HOXD11	P31277	338 aa	Predicted RBP	11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	PPP2R5C	Q13362	524 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	BECN1	Q14457	450 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	GDF6	Q6KF10	455 aa	Predicted RBP	11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	MIER3	Q7Z3K6	550 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	BRAP	Q7Z569	592 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	ATP6V0A1	Q93050	837 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	UNC45A	Q9H3U1	944 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	DISC1	Q9NRI5	854 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	FOXD4L1	Q9NU39	408 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	PCDHA12	Q9UN75	941 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	TRPC6	Q9Y210	931 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	NRCAM	Q92823	1304 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	DNAH12	Q6ZR08	3092 aa		11.26	□□□□□ -0.61
MACF1-222	ENST00000494012	TRIP12	Q14669	1992 aa	Predicted RBP	11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	LAD1	O00515	517 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	PITPNM1	O00562	1244 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	SYT1	P21579	422 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	MARK3	P27448	753 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	HOXC8	P31273	242 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	PPFIA1	Q13136	1202 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	SWSAP1	Q6NVH7	229 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	PDXDC2P	Q6P474	469 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	B3GNT9	Q6UX72	402 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	CKAP2L	Q8IYA6	745 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	HAS1	Q92839	578 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	GJA10	Q969M2	543 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	FAM167A	Q96KS9	214 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	PCYT2	Q99447	389 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	HIPK3	Q9H422	1215 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	RNPEP	Q9H4A4	650 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	GABBR1	Q9UBS5	961 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	VAV3	Q9UKW4	847 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	IGSF9B	Q9UPX0	1349 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	COL1A2	P08123	1366 aa		11.25	□□□□□ -0.61
MACF1-222	ENST00000494012	POTEB3	A0JP26	581 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TRIM43B	A6NCK2	446 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	RRN3P2	A6NIE6	340 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	STX6	O43752	255 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	DKC1	O60832	514 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TIMP1	P01033	207 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	OR52Z1	P0C646	297 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	PTK7	Q13308	1070 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	BFSP2	Q13515	415 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	PLCB4	Q15147	1175 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	ZNF174	Q15697	407 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TMEM266	Q2M3C6	531 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	POTEB	Q6S5H4	581 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	SH3RF1	Q7Z6J0	888 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	SERINC5	Q86VE9	423 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TMEM199	Q8N511	208 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	CAGE1	Q8TC20	777 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	ATP8B4	Q8TF62	1192 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	PPP1R13L	Q8WUF5	828 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	LMBR1	Q8WVP7	490 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	BBX	Q8WY36	941 aa	Predicted RBP	11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	MTMR9	Q96QG7	549 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	NOC4L	Q9BVI4	516 aa	Known RBP	11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	PPP1R12C	Q9BZL4	782 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	TTC12	Q9H892	705 aa	Predicted RBP	11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	SETD4	Q9NVD3	440 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	CEP131	Q9UPN4	1083 aa		11.24	□□□□□ -0.61
MACF1-222	ENST00000494012	ARID2	Q68CP9	1835 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	WNT7A	O00755	349 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	HBP1	O60381	514 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	BMP15	O95972	392 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	RPLP2	P05387	115 aa	Known RBP	11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	CYP2C9	P11712	490 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	TXK	P42681	527 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	MAGEA10	P43363	369 aa	Predicted RBP	11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	TOB1	P50616	345 aa	Predicted RBP	11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	PSMC5	P62195	406 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	PRKCE	Q02156	737 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	FPGS	Q05932	587 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	SPIRE1	Q08AE8	756 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	GRIK4	Q16099	956 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	NCAPH2	Q6IBW4	605 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	MFSD5	Q6N075	450 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	TAF2	Q6P1X5	1199 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	RETREG2	Q8NC44	543 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	NEK9	Q8TD19	979 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	RAB34	Q9BZG1	259 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	TUBE1	Q9UJT0	475 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	PCDHB6	Q9Y5E3	794 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	LOXHD1	Q8IVV2	1947 aa		11.23	□□□□□ -0.61
MACF1-222	ENST00000494012	CAND2	O75155	1236 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	OAT	P04181	439 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	INSRR	P14616	1297 aa		11.22	□□□□□ -0.61
MACF1-222	ENST00000494012	PRPH	P41219	470 aa		11.22	□□□□□ -0.61

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