RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 ST3GAL2Q16842 350 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 RSPO4Q2I0M5 234 aaPredicted RBP15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 RRP12Q5JTH9 1297 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 FBXO47Q5MNV8 452 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 NPAS4Q8IUM7 802 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 FANCMQ8IYD8 2048 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 DCLK2Q8N568 766 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 PDCD2LQ9BRP1 358 aa15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 AGO3Q9H9G7 860 aaKnown RBP15.98■□□□□ 0.15
EXOSC3-207ENST00000490516 FSCN2O14926 492 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 FGF18O76093 207 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 CFBP00751 764 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 CD52P31358 61 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 UBE3AQ05086 875 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 APOBRQ0VD83 1088 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 PLPP4Q5VZY2 271 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 IL31RAQ8NI17 732 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 SEMA4AQ9H3S1 761 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 LIMD1Q9UGP4 676 aa15.97■□□□□ 0.15
EXOSC3-207ENST00000490516 NOP56O00567 594 aaKnown RBP15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 WEE2P0C1S8 567 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 SPOUT1Q5T280 376 aaKnown RBP15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 TSHZ1Q6ZSZ6 1077 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 LRRCC1Q9C099 1032 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 TCP11L1Q9NUJ3 509 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 TMEM260Q9NX78 707 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 HCSTQ9UBK5 93 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 ANAPC4Q9UJX5 808 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 TELO2Q9Y4R8 837 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 PCDHB12Q9Y5F1 795 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 CDY2AQ9Y6F7 541 aa15.96■□□□□ 0.15
EXOSC3-207ENST00000490516 USP24Q9UPU5 2620 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 OPLAHO14841 1288 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 FGRP09769 529 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 STAG3L1P0CL83 205 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 TGFB3P10600 412 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 HOXB8P17481 243 aaPredicted RBP15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 PGM5Q15124 567 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 UTP14CQ5TAP6 766 aaKnown RBP15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 VSIG10LQ86VR7 867 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 ADGRF4Q8IZF3 695 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 RASGRP4Q8TDF6 673 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 DNAJB3Q8WWF6 145 aa15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 RALYQ9UKM9 306 aaKnown RBP15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 MRPL11Q9Y3B7 192 aaKnown RBP15.95■□□□□ 0.14
EXOSC3-207ENST00000490516 HIDE1A8MVS5 230 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 SCG2P13521 617 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 HSD17B4P51659 736 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 ZMYM1Q5SVZ6 1142 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 PDE12Q6L8Q7 609 aaKnown RBP15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 THNSL1Q8IYQ7 743 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 RIN2Q8WYP3 895 aaPredicted RBP15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 GPR20Q99678 358 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 RTP3Q9BQQ7 232 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 ADAM7Q9H2U9 754 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 NRCAMQ92823 1304 aa15.94■□□□□ 0.14
EXOSC3-207ENST00000490516 DENND4AQ7Z401 1863 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 HOXA13P31271 388 aaPredicted RBP15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 VPS53Q5VIR6 699 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 CES5AQ6NT32 575 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 TAF2Q6P1X5 1199 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 CYFIP1Q7L576 1253 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 RSPH3Q86UC2 560 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 ZDHHC14Q8IZN3 488 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 TDRD5Q8NAT2 981 aaKnown RBP15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 RUBCNQ92622 972 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 NECTIN4Q96NY8 510 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 ZNF215Q9UL58 517 aaPredicted RBP15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 LRFN2Q9ULH4 789 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 CHD8Q9HCK8 2581 aa15.93■□□□□ 0.14
EXOSC3-207ENST00000490516 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 STOX1Q6ZVD7 989 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 SIX5Q8N196 739 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 COLGALT1Q8NBJ5 622 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 FTHL17Q9BXU8 183 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 ENTPD7Q9NQZ7 604 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 AAASQ9NRG9 546 aa15.92■□□□□ 0.14
EXOSC3-207ENST00000490516 TBKBP1A7MCY6 615 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 CCND2P30279 289 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 MRPS6P82932 125 aaKnown RBP15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 SP4Q02446 784 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 ITIH3Q06033 890 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 COL9A2Q14055 689 aaPredicted RBP15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 KANK3Q6NY19 840 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 METTL7BQ6UX53 244 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 CASP10Q92851 521 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 ZBTB10Q96DT7 871 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 TTC14Q96N46 770 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 ZBTB40Q9NUA8 1239 aa15.91■□□□□ 0.14
EXOSC3-207ENST00000490516 TYW1Q9NV66 732 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms