RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 SLC12A7Q9Y666 1083 aa9.01□□□□□ -0.97
SMC6-209ENST00000489535 WDR90Q96KV7 1748 aa9□□□□□ -0.97
SMC6-209ENST00000489535 PTPRFP10586 1907 aa9□□□□□ -0.97
SMC6-209ENST00000489535 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
SMC6-209ENST00000489535 CPLX1O14810 134 aa9□□□□□ -0.97
SMC6-209ENST00000489535 DHX16O60231 1041 aaKnown RBP9□□□□□ -0.97
SMC6-209ENST00000489535 NMT2O60551 498 aa9□□□□□ -0.97
SMC6-209ENST00000489535 ZSCAN22P10073 491 aaPredicted RBP9□□□□□ -0.97
SMC6-209ENST00000489535 PDCP20941 246 aa9□□□□□ -0.97
SMC6-209ENST00000489535 HMGN5P82970 282 aaKnown RBP9□□□□□ -0.97
SMC6-209ENST00000489535 TCP10Q12799 353 aa9□□□□□ -0.97
SMC6-209ENST00000489535 PLCL1Q15111 1095 aa9□□□□□ -0.97
SMC6-209ENST00000489535 PKN1Q16512 942 aa9□□□□□ -0.97
SMC6-209ENST00000489535 OCLNQ16625 522 aa9□□□□□ -0.97
SMC6-209ENST00000489535 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
SMC6-209ENST00000489535 CCDC178Q5BJE1 867 aa9□□□□□ -0.97
SMC6-209ENST00000489535 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
SMC6-209ENST00000489535 PDE12Q6L8Q7 609 aaKnown RBP9□□□□□ -0.97
SMC6-209ENST00000489535 ZSCAN29Q8IWY8 852 aaPredicted RBP9□□□□□ -0.97
SMC6-209ENST00000489535 NUP133Q8WUM0 1156 aa9□□□□□ -0.97
SMC6-209ENST00000489535 SWAP70Q9UH65 585 aa9□□□□□ -0.97
SMC6-209ENST00000489535 KIF3AQ9Y496 699 aa9□□□□□ -0.97
SMC6-209ENST00000489535 COL11A1P12107 1806 aaPredicted RBP9□□□□□ -0.97
SMC6-209ENST00000489535 ZNF541Q9H0D2 1346 aa9□□□□□ -0.97
SMC6-209ENST00000489535 RBBP6Q7Z6E9 1792 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 SMCHD1A6NHR9 2005 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 CLRN2A0PK11 232 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 DDTLA6NHG4 134 aaPredicted RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 FZD9O00144 591 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 ZBTB39O15060 712 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 ENTPD3O75355 529 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 CDKL5O76039 1030 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 BAG4O95429 457 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 F13A1P00488 732 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 RPS12P25398 132 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 MCM4P33991 863 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 GABPAQ06546 454 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 EXOSC6Q5RKV6 272 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 CPLX2Q6PUV4 134 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 CAPN12Q6ZSI9 719 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 ZNF765Q7L2R6 523 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 VN1R5Q7Z5H4 357 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 SPRED2Q7Z698 418 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 ZFPM1Q8IX07 1006 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 SYT17Q9BSW7 474 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 DHX36Q9H2U1 1008 aaKnown RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 KAT14Q9H8E8 782 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 TCP11L1Q9NUJ3 509 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 ZNF70Q9UC06 446 aaPredicted RBP8.99□□□□□ -0.97
SMC6-209ENST00000489535 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 SLC5A6Q9Y289 635 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 MYH7BA7E2Y1 1941 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
SMC6-209ENST00000489535 SHTN1A0MZ66 631 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 TCP10L2B9ZVM9 353 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 MYO1BO43795 1136 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 DDAH1O94760 285 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CALM1P0DP23 149 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CALM2P0DP24 149 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CALM3P0DP25 149 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
SMC6-209ENST00000489535 LMNB1P20700 586 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 GMPSP49915 693 aaPredicted RBP8.98□□□□□ -0.97
SMC6-209ENST00000489535 MMP14P50281 582 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 RCAN1P53805 252 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 SOX4Q06945 474 aaPredicted RBP8.98□□□□□ -0.97
SMC6-209ENST00000489535 KRTAP19-4Q3LI73 84 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 RCSD1Q6JBY9 416 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CLEC17AQ6ZS10 378 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CDC37L1Q7L3B6 337 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 CRACR2BQ8N4Y2 399 aaPredicted RBP8.98□□□□□ -0.97
SMC6-209ENST00000489535 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 EHD4Q9H223 541 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 VEZTQ9HBM0 779 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 MYOZ2Q9NPC6 264 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 IL17RBQ9NRM6 502 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 ORC3Q9UBD5 711 aaPredicted RBP8.98□□□□□ -0.97
SMC6-209ENST00000489535 ATRNL1Q5VV63 1379 aa8.98□□□□□ -0.97
SMC6-209ENST00000489535 PAPPA2Q9BXP8 1791 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 GOLGA6L22H0YM25 854 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 H3BQV1 296 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 PRMT3O60678 531 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 FDPSP14324 419 aaKnown RBP8.97□□□□□ -0.97
SMC6-209ENST00000489535 AKR1B1P15121 316 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 IFNAR1P17181 557 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 SHMT1P34896 483 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 SSRP1Q08945 709 aaKnown RBP8.97□□□□□ -0.97
SMC6-209ENST00000489535 IKBKEQ14164 716 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 NTRK3Q16288 839 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 ATG4DQ86TL0 474 aaPredicted RBP8.97□□□□□ -0.97
SMC6-209ENST00000489535 DGKHQ86XP1 1220 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 FANCBQ8NB91 859 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 GLIS3Q8NEA6 775 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 CTCFLQ8NI51 663 aaPredicted RBP8.97□□□□□ -0.97
SMC6-209ENST00000489535 FAM151AQ8WW52 585 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 FAM168AQ92567 244 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 PHKBQ93100 1093 aa8.97□□□□□ -0.97
SMC6-209ENST00000489535 ZBED3Q96IU2 234 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms