RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 VAV3Q9UKW4 847 aa21.57■■□□□ 1.04
SYNGR1-207ENST00000489206 MSH4O15457 936 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 TLR2O60603 784 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 NR2F2P24468 414 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 GFPT1Q06210 699 aaPredicted RBP21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 KNOP1Q1ED39 458 aaKnown RBP21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 CC2D2BQ6DHV5 1058 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 CNKSR1Q969H4 720 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 REEP2Q9BRK0 252 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 GANQ9H2C0 597 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 PLCB1Q9NQ66 1216 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 ADAM21Q9UKJ8 722 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 GH2P01242 217 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 ERCC3P19447 782 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 AARSP49588 968 aaKnown RBP eCLIP21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 ZHX3Q9H4I2 956 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 CALCOCO1Q9P1Z2 691 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 RNF14Q9UBS8 474 aa21.56■■□□□ 1.04
SYNGR1-207ENST00000489206 RBBP6Q7Z6E9 1792 aaKnown RBP21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 EYA4O95677 639 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 RASSF7Q02833 373 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 KCNH2Q12809 1159 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 PABPC4Q13310 644 aaKnown RBP eCLIP21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 SLC18A3Q16572 532 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 SFR1Q86XK3 245 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 SUPT20HQ8NEM7 779 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 TDRD3Q9H7E2 651 aaKnown RBP21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 ARMCX3Q9UH62 379 aaPredicted RBP21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 HDAC9Q9UKV0 1011 aa21.55■■□□□ 1.04
SYNGR1-207ENST00000489206 OPLAHO14841 1288 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 SLC16A3O15427 465 aaKnown RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 GAP43P17677 238 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 PSMC6P62333 389 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 C2orf54Q08AI8 447 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 RAD51AP2Q09MP3 1159 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 ASIC2Q16515 512 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 CCNI2Q6ZMN8 369 aaPredicted RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 UIMC1Q96RL1 719 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 METTL14Q9HCE5 456 aaKnown RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 ARHGEF10LQ9HCE6 1279 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 TYW1Q9NV66 732 aaKnown RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 RNF216Q9NWF9 866 aaPredicted RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 PRR12Q9ULL5 1215 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 ERICH4A6NGS2 130 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 RPL13P26373 211 aaKnown RBP21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 ZNF76P36508 570 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 PAFAH1B1P43034 410 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 SNAP25P60880 206 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 C10orf76Q5T2E6 689 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 CCDC181Q5TID7 509 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 COG1Q8WTW3 980 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 CSRNP1Q96S65 589 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 TUFT1Q9NNX1 390 aa21.54■■□□□ 1.04
SYNGR1-207ENST00000489206 TBCAO75347 108 aaKnown RBP21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 AFPP02771 609 aaKnown RBP21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 CASP5P51878 434 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 RAPGEF1Q13905 1077 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 NAB2Q15742 525 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 SPATA4Q8NEY3 305 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 CCDC102AQ96A19 550 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 OLFML3Q9NRN5 406 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 VPS18Q9P253 973 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 SALL4Q9UJQ4 1053 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 BZW2Q9Y6E2 419 aaKnown RBP21.53■■□□□ 1.04
SYNGR1-207ENST00000489206 MEIS1O00470 390 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 ANXA13P27216 316 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 STAT2P52630 851 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 KLHL30Q0D2K2 578 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 AOC3Q16853 763 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 KLHDC7AQ5VTJ3 777 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 DRC1Q96MC2 740 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 EIF2AK1Q9BQI3 630 aaKnown RBP21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 CRACR2AQ9BSW2 395 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 TMOD2Q9NZR1 351 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 ATP8B3O60423 1300 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 IGLV3-22A0A075B6J6 115 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 BTNL10A8MVZ5 291 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 MUTP22033 750 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 TNNT3P45378 269 aaPredicted RBP21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 JAG1P78504 1218 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 SLC15A2Q16348 729 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 TLR10Q9BXR5 811 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 FBXL5Q9UKA1 691 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 HPCAL4Q9UM19 191 aa21.52■■□□□ 1.04
SYNGR1-207ENST00000489206 A0A1W2PRG0 241 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 SMCHD1A6NHR9 2005 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 EIF3DO15371 548 aaKnown RBP eCLIP21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 XRCC5P13010 732 aaKnown RBP21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 HOXD13P35453 343 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 C7orf43Q8WVR3 580 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 TBC1D5Q92609 795 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 EHMT1Q9H9B1 1298 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 GOPCQ9HD26 462 aa21.51■■□□□ 1.03
SYNGR1-207ENST00000489206 R3HDM1Q15032 1099 aaKnown RBP21.5■■□□□ 1.03
SYNGR1-207ENST00000489206 NFIL3Q16649 462 aa21.5■■□□□ 1.03
SYNGR1-207ENST00000489206 GLE1Q53GS7 698 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms