RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 MAML3Q96JK9 1138 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 MPHOSPH6Q99547 160 aaKnown RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 APBA2Q99767 749 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 PXMP2Q9NR77 195 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 FLRT1Q9NZU1 646 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 ADD3Q9UEY8 706 aaKnown RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 GJD2Q9UKL4 321 aa6.41□□□□□ -1.38
COPS3-208ENST00000486032 ZHX1Q9UKY1 873 aaPredicted RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 MKI67P46013 3256 aaKnown RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 RBBP6Q7Z6E9 1792 aaKnown RBP6.41□□□□□ -1.38
COPS3-208ENST00000486032 TNRC18O15417 2968 aaPredicted RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 DNAJC25-GNG10A0A024R161 153 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 ASB14A6NK59 587 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 C1QTNF9BB2RNN3 333 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 B4DLN1 442 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 PIK3CDO00329 1044 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 MARCH6O60337 910 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 FOSP01100 380 aaPredicted RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 PTGS1P23219 599 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 CCND2P30279 289 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 GRK4P32298 578 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 CLK2P49760 499 aaKnown RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 ARHGAP4P98171 946 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 CEBPZQ03701 1054 aaKnown RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 AP3B2Q13367 1082 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 TPRNQ4KMQ1 711 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 MFSD14CQ5VZR4 134 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 ANO1Q5XXA6 986 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 FOXR1Q6PIV2 292 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 FBXO46Q6PJ61 603 aaPredicted RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 SEPT14Q6ZU15 432 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 Q6ZVU0 165 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 ARMCX2Q7L311 632 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 CCDC116Q8IYX3 515 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 SAMD3Q8N6K7 520 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 DAGLBQ8NCG7 672 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 USP6NLQ92738 828 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 FGD4Q96M96 766 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 PDCD2LQ9BRP1 358 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 MAP3K20Q9NYL2 800 aaKnown RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.38
COPS3-208ENST00000486032 MTMR6Q9Y217 621 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 CNPY2Q9Y2B0 182 aa6.4□□□□□ -1.38
COPS3-208ENST00000486032 ASTN1O14525 1302 aa6.4□□□□□ -1.39
COPS3-208ENST00000486032 PLXNA1Q9UIW2 1896 aa6.4□□□□□ -1.39
COPS3-208ENST00000486032 LRRC37A2A6NM11 1700 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 MCM3APO60318 1980 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 M0R2N6 131 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 GPR37O15354 613 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 CCNT1O60563 726 aaKnown RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 TDP2O95551 362 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 GNRH1P01148 92 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 INHAP05111 366 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 ZSCAN22P10073 491 aaPredicted RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 NCLP19338 710 aaKnown RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 MCM7P33993 719 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 CTSOP43234 321 aaPredicted RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 PRMT2P55345 433 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 RESTQ13127 1097 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 ZNF174Q15697 407 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 STXBP2Q15833 593 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 SLC9C1Q4G0N8 1177 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 PRR16Q569H4 304 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 MCTP2Q6DN12 878 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.39□□□□□ -1.39
COPS3-208ENST00000486032 NEK8Q86SG6 692 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 BPHLQ86WA6 291 aaPredicted RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 PLA2G4DQ86XP0 818 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 NOSTRINQ8IVI9 506 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 TRPV1Q8NER1 839 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 DNERQ8NFT8 737 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 ZNF333Q96JL9 665 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 FOXP1Q9H334 677 aaPredicted RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 PDGFCQ9NRA1 345 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 CUEDC1Q9NWM3 386 aaPredicted RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 DIS3Q9Y2L1 958 aaKnown RBP6.39□□□□□ -1.39
COPS3-208ENST00000486032 FRMPD3Q5JV73 1810 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 ZNF236Q9UL36 1845 aa6.39□□□□□ -1.39
COPS3-208ENST00000486032 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 DDX39AO00148 427 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 OIP5O43482 229 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 EIF3JO75822 258 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 SNAI1O95863 264 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 F13A1P00488 732 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 HMGCRP04035 888 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 HOXC6P09630 235 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 ARP10275 920 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 XRCC5P13010 732 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 EN2P19622 333 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 CCND3P30281 292 aaPredicted RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 SREBF1P36956 1147 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 ADCYAP1R1P41586 468 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 MRPS9P82933 396 aaKnown RBP6.38□□□□□ -1.39
COPS3-208ENST00000486032 SP4Q02446 784 aa6.38□□□□□ -1.39
COPS3-208ENST00000486032 GHRHRQ02643 423 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms