RNA–Protein interactions for RNA: ENST00000485769.5

PBX1-209, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-209ENST00000485769 BFSP2Q13515 415 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 BECN1Q14457 450 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 GDF6Q6KF10 455 aaPredicted RBP23.28■■□□□ 1.32
PBX1-209ENST00000485769 BRAPQ7Z569 592 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 PCYT2Q99447 389 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 HIPK3Q9H422 1215 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 PCDHA12Q9UN75 941 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 TRPC6Q9Y210 931 aa23.28■■□□□ 1.32
PBX1-209ENST00000485769 TRIM43BA6NCK2 446 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 CHMP2AO43633 222 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 MARK3P27448 753 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 PPFIA1Q13136 1202 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 PTK7Q13308 1070 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 SH3RF1Q7Z6J0 888 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 CKAP2LQ8IYA6 745 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 RETREG2Q8NC44 543 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 HAS1Q92839 578 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 ATP6V0A1Q93050 837 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 TRIM43Q96BQ3 446 aaPredicted RBP23.27■■□□□ 1.32
PBX1-209ENST00000485769 FAM167AQ96KS9 214 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 RNPEPQ9H4A4 650 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 FOXD4L1Q9NU39 408 aa23.27■■□□□ 1.32
PBX1-209ENST00000485769 MAFBQ9Y5Q3 323 aaPredicted RBP23.27■■□□□ 1.32
PBX1-209ENST00000485769 POTEB3A0JP26 581 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 HBP1O60381 514 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 SYT1P21579 422 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 ZNF174Q15697 407 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 POTEBQ6S5H4 581 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 B3GNT9Q6UX72 402 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 CCDC60Q8IWA6 550 aaPredicted RBP23.26■■□□□ 1.31
PBX1-209ENST00000485769 TMEM199Q8N511 208 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 CAGE1Q8TC20 777 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 GABBR1Q9UBS5 961 aa23.26■■□□□ 1.31
PBX1-209ENST00000485769 MKI67P46013 3256 aaKnown RBP23.26■■□□□ 1.31
PBX1-209ENST00000485769 LAD1O00515 517 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 PITPNM1O00562 1244 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 RPLP2P05387 115 aaKnown RBP23.25■■□□□ 1.31
PBX1-209ENST00000485769 HOXC8P31273 242 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 PLCB4Q15147 1175 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 ATP8B4Q8TF62 1192 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 PPP1R13LQ8WUF5 828 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 GJA10Q969M2 543 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 MTMR9Q96QG7 549 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 NOC4LQ9BVI4 516 aaKnown RBP23.25■■□□□ 1.31
PBX1-209ENST00000485769 NRBP2Q9NSY0 501 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 SETD4Q9NVD3 440 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 VAV3Q9UKW4 847 aa23.25■■□□□ 1.31
PBX1-209ENST00000485769 TNRC18O15417 2968 aaPredicted RBP23.25■■□□□ 1.31
PBX1-209ENST00000485769 OR52Z1P0C646 297 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 CYP2C9P11712 490 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 TXKP42681 527 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 GRIK4Q16099 956 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 MFSD5Q6N075 450 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 BBXQ8WY36 941 aaPredicted RBP23.24■■□□□ 1.31
PBX1-209ENST00000485769 TTC12Q9H892 705 aaPredicted RBP23.24■■□□□ 1.31
PBX1-209ENST00000485769 CEP131Q9UPN4 1083 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 COL1A2P08123 1366 aa23.24■■□□□ 1.31
PBX1-209ENST00000485769 PARNO95453 639 aaKnown RBP23.23■■□□□ 1.31
PBX1-209ENST00000485769 INSRRP14616 1297 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 MAGEA10P43363 369 aaPredicted RBP23.23■■□□□ 1.31
PBX1-209ENST00000485769 EPHA7Q15375 998 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 TMEM266Q2M3C6 531 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 ZNF484Q5JVG2 852 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 TAF2Q6P1X5 1199 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 SERINC5Q86VE9 423 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 LMBR1Q8WVP7 490 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 BADQ92934 168 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 PPP1R12CQ9BZL4 782 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 IGSF9BQ9UPX0 1349 aa23.23■■□□□ 1.31
PBX1-209ENST00000485769 STX6O43752 255 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 CAND2O75155 1236 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 BMP15O95972 392 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 P4HBP07237 508 aaKnown RBP23.22■■□□□ 1.31
PBX1-209ENST00000485769 BMP8BP34820 402 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 PSMC5P62195 406 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 MDM2Q00987 491 aaPredicted RBP23.22■■□□□ 1.31
PBX1-209ENST00000485769 FPGSQ05932 587 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 PPIGQ13427 754 aaKnown RBP eCLIP23.22■■□□□ 1.31
PBX1-209ENST00000485769 NCAPH2Q6IBW4 605 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 RSPH3Q86UC2 560 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 NEK9Q8TD19 979 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 GDF15Q99988 308 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 RAB34Q9BZG1 259 aa23.22■■□□□ 1.31
PBX1-209ENST00000485769 ZSCAN16Q9H4T2 348 aaPredicted RBP23.22■■□□□ 1.31
PBX1-209ENST00000485769 WNT7AO00755 349 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 QARSP47897 775 aaKnown RBP23.21■■□□□ 1.31
PBX1-209ENST00000485769 TOB1P50616 345 aaPredicted RBP23.21■■□□□ 1.31
PBX1-209ENST00000485769 ADAM17P78536 824 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 RBL2Q08999 1139 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 UBE2OQ9C0C9 1292 aaKnown RBP23.21■■□□□ 1.31
PBX1-209ENST00000485769 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 TUBE1Q9UJT0 475 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 STK24Q9Y6E0 443 aa23.21■■□□□ 1.31
PBX1-209ENST00000485769 KAT6AQ92794 2004 aa23.2■■□□□ 1.3
PBX1-209ENST00000485769 TREHO43280 583 aa23.2■■□□□ 1.3
PBX1-209ENST00000485769 OATP04181 439 aa23.2■■□□□ 1.3
PBX1-209ENST00000485769 CYP2C18P33260 490 aa23.2■■□□□ 1.3
PBX1-209ENST00000485769 RFC2P35250 354 aa23.2■■□□□ 1.3
PBX1-209ENST00000485769 ZNF200P98182 395 aaPredicted RBP23.2■■□□□ 1.3
PBX1-209ENST00000485769 PTGDRQ13258 359 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms