RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 ABCG4Q9H172 646 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 CAAP1Q9H8G2 361 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 FBXO10Q9UK96 956 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 DMTF1Q9Y222 760 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
CCDC39-205ENST00000485055 SNX5Q9Y5X3 404 aa6.04□□□□□ -1.44
CCDC39-205ENST00000485055 ZNF532Q9HCE3 1301 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 SYNDIG1LA6NDD5 238 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 WDR46O15213 610 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 SGPL1O95470 568 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TCP10Q12799 353 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 IFT88Q13099 833 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 GALEQ14376 348 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 HSP90AA2PQ14568 343 aaPredicted RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 FAM26DQ5JW98 314 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ZMYM1Q5SVZ6 1142 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TREML2Q5T2D2 321 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ALG1LQ6GMV1 187 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TGFBRAP1Q8WUH2 860 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ELAC2Q9BQ52 826 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 AATFQ9NY61 560 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 HOXC10Q9NYD6 342 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TMOD4Q9NZQ9 345 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 MAPK8IP1Q9UQF2 711 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 RPTORQ8N122 1335 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 DOCK3Q8IZD9 2030 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 GTPBP10A4D1E9 387 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 IPO5O00410 1097 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TOR1BO14657 336 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ZBTB39O15060 712 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 RNF113AO15541 343 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 RRP1P56182 461 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 HERVK_113P62684 666 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 SNX17Q15036 470 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ERMP1Q7Z2K6 904 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 AFAP1L2Q8N4X5 818 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ZNF454Q8N9F8 522 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 GPRC5AQ8NFJ5 357 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ANKS1AQ92625 1134 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 TAF4BQ92750 862 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 COA7Q96BR5 231 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 OSBPL7Q9BZF2 842 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 MROH8Q9H579 483 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 HELLSQ9NRZ9 838 aa6.03□□□□□ -1.44
CCDC39-205ENST00000485055 DDX20Q9UHI6 824 aaKnown RBP6.03□□□□□ -1.44
CCDC39-205ENST00000485055 ERC2O15083 957 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MSCO60682 206 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 GLRX3O76003 335 aaKnown RBP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 GFPT2O94808 682 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 IL33O95760 270 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 SLC25A27O95847 323 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 PTPREP23469 700 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CASQ1P31415 396 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MAPK9P45984 424 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 PLA2G4AP47712 749 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 DYNLL1P63167 89 aaKnown RBP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CCNA1P78396 465 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 LAMC2Q13753 1193 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 PRKG1Q13976 671 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 GRM3Q14832 879 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ABCB5Q2M3G0 1257 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MTERF2Q49AM1 385 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CERKLQ49MI3 558 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 SLC9C1Q4G0N8 1177 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 C6orf118Q5T5N4 469 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 UNC5DQ6UXZ4 953 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MILR1Q7Z6M3 343 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ANKRD13BQ86YJ7 626 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 TMEM106CQ9BVX2 250 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ANTXR1Q9H6X2 564 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ZFATQ9P243 1243 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 PRKAG3Q9UGI9 489 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CEP131Q9UPN4 1083 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 POTEFA5A3E0 1075 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 GSG1L2A8MUP6 293 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CCL5P13501 91 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ATP1A2P50993 1020 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ERVK-9P63128 1117 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ERVK-24P63145 666 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 SPP2Q13103 211 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 DDR2Q16832 855 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 SLC9C2Q5TAH2 1124 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ANKRD45Q5TZF3 282 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CTR9Q6PD62 1173 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MAMDC4Q6UXC1 1216 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 RDH13Q8NBN7 331 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 POF1BQ8WVV4 589 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 MFSD3Q96ES6 412 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 EAF1Q96JC9 268 aaPredicted RBP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 CSRNP2Q9H175 543 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 VCPKMTQ9H867 229 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ZNF287Q9HBT7 754 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 ALG13Q9NP73 1137 aaKnown RBP6.02□□□□□ -1.45
CCDC39-205ENST00000485055 EXOC6BQ9Y2D4 811 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 SLC4A7Q9Y6M7 1214 aa6.02□□□□□ -1.45
CCDC39-205ENST00000485055 PMM2O15305 246 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 ADCY3O60266 1144 aa6.01□□□□□ -1.45
CCDC39-205ENST00000485055 TMEM127O75204 238 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms