RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ZNF302Q9NR11 478 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 DISC1Q9NRI5 854 aa17.62■□□□□ 0.41
RPP40-206ENST00000483546 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 A0A1W2PPC1 479 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 BACH1O14867 736 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 MARCH6O60337 910 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 NEMFO60524 1076 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 MAGEA10P43363 369 aaPredicted RBP17.61■□□□□ 0.41
RPP40-206ENST00000483546 RBL2Q08999 1139 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 PTK7Q13308 1070 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 MFSD5Q6N075 450 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
RPP40-206ENST00000483546 SAMM50Q9Y512 469 aa17.61■□□□□ 0.41
RPP40-206ENST00000483546 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
RPP40-206ENST00000483546 RRN3P2A6NIE6 340 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 RPLP2P05387 115 aaKnown RBP17.6■□□□□ 0.41
RPP40-206ENST00000483546 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
RPP40-206ENST00000483546 PPFIA1Q13136 1202 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 CALCRLQ16602 461 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 MIER3Q7Z3K6 550 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 CCDC60Q8IWA6 550 aaPredicted RBP17.6■□□□□ 0.41
RPP40-206ENST00000483546 TMEM199Q8N511 208 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 FAM167AQ96KS9 214 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 UNC45AQ9H3U1 944 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 RNPEPQ9H4A4 650 aa17.6■□□□□ 0.41
RPP40-206ENST00000483546 COL1A2P08123 1366 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 IGSF9BQ9UPX0 1349 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 HBP1O60381 514 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 CAND2O75155 1236 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 PARNO95453 639 aaKnown RBP17.59■□□□□ 0.41
RPP40-206ENST00000483546 ADAM17P78536 824 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 RILPL1Q5EBL4 403 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 TTC38Q5R3I4 469 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 SWSAP1Q6NVH7 229 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 PDXDC2PQ6P474 469 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 ATP8B4Q8TF62 1192 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 HAS1Q92839 578 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 BADQ92934 168 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 ATP6V0A1Q93050 837 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 PRO3102Q9H379 93 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 VAV3Q9UKW4 847 aa17.59■□□□□ 0.41
RPP40-206ENST00000483546 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 DKC1O60832 514 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPP40-206ENST00000483546 CYP2C9P11712 490 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 MARK3P27448 753 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 RFC2P35250 354 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.4
RPP40-206ENST00000483546 FPGSQ05932 587 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPP40-206ENST00000483546 PLCB4Q15147 1175 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 GRIK4Q16099 956 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 TAF2Q6P1X5 1199 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 RETREG2Q8NC44 543 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 BBXQ8WY36 941 aaPredicted RBP17.58■□□□□ 0.4
RPP40-206ENST00000483546 MTMR9Q96QG7 549 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 UIMC1Q96RL1 719 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 CTAGE1Q96RT6 745 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 PPP1R12CQ9BZL4 782 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 PCDHA12Q9UN75 941 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 CEP131Q9UPN4 1083 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 TRPC6Q9Y210 931 aa17.58■□□□□ 0.4
RPP40-206ENST00000483546 MBLAC1A4D2B0 266 aaPredicted RBP17.57■□□□□ 0.4
RPP40-206ENST00000483546 LAD1O00515 517 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 CHMP2AO43633 222 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
RPP40-206ENST00000483546 ITGB8P26012 769 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 MCM7P33993 719 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 ZNF484Q5JVG2 852 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
RPP40-206ENST00000483546 SETD4Q9NVD3 440 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 GABBR1Q9UBS5 961 aa17.57■□□□□ 0.4
RPP40-206ENST00000483546 PFKMP08237 780 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 INSRRP14616 1297 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 ATP2B1P20020 1258 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 CYP2C18P33260 490 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 EPHA7Q15375 998 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 RPAINQ86UA6 219 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 NEK9Q8TD19 979 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 GJA10Q969M2 543 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
RPP40-206ENST00000483546 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 TUBE1Q9UJT0 475 aa17.56■□□□□ 0.4
RPP40-206ENST00000483546 WNT7AO00755 349 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 TREHO43280 583 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 SELPP16109 830 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 SYT1P21579 422 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 HIC1Q14526 733 aa17.55■□□□□ 0.4
RPP40-206ENST00000483546 RSPH3Q86UC2 560 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms