RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 H0YGN5 161 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 GNAT1P11488 350 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 PTGISQ16647 500 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 GDF6Q6KF10 455 aaPredicted RBP18.87■□□□□ 0.61
SF1-215ENST00000482693 PDXDC2PQ6P474 469 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 CCDC60Q8IWA6 550 aaPredicted RBP18.87■□□□□ 0.61
SF1-215ENST00000482693 PPP1R13LQ8WUF5 828 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 PRDM5Q9NQX1 630 aaPredicted RBP18.87■□□□□ 0.61
SF1-215ENST00000482693 TBX21Q9UL17 535 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 MTMR6Q9Y217 621 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 NOD1Q9Y239 953 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 PCDHB6Q9Y5E3 794 aa18.87■□□□□ 0.61
SF1-215ENST00000482693 DOCK5Q9H7D0 1870 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 NRCAMQ92823 1304 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 C17orf102A2RUQ5 167 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 LAD1O00515 517 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 MARK3P27448 753 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 HOXC8P31273 242 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 TXKP42681 527 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 PLCB4Q15147 1175 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 SH3RF1Q7Z6J0 888 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 FERMT3Q86UX7 667 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 C4orf32Q8N8J7 132 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 SPRYD3Q8NCJ5 442 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
SF1-215ENST00000482693 TMEM60Q9H2L4 133 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 ZSCAN16Q9H4T2 348 aaPredicted RBP18.86■□□□□ 0.61
SF1-215ENST00000482693 TTC12Q9H892 705 aaPredicted RBP18.86■□□□□ 0.61
SF1-215ENST00000482693 GABBR1Q9UBS5 961 aa18.86■□□□□ 0.61
SF1-215ENST00000482693 ZMYND8Q9ULU4 1186 aaPredicted RBP18.86■□□□□ 0.61
SF1-215ENST00000482693 POTEB3A0JP26 581 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 RRN3P2A6NIE6 340 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 OR52Z1P0C646 297 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 SYN1P17600 705 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 SPIRE1Q08AE8 756 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 NBR1Q14596 966 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 POTEBQ6S5H4 581 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 CKAP2LQ8IYA6 745 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 ATP8B4Q8TF62 1192 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 ATP6V0A1Q93050 837 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.85■□□□□ 0.61
SF1-215ENST00000482693 SETD4Q9NVD3 440 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 TRPC6Q9Y210 931 aa18.85■□□□□ 0.61
SF1-215ENST00000482693 ALPK3Q96L96 1907 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 EML1O00423 815 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 HBP1O60381 514 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 TIMP1P01033 207 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 RAG1P15918 1043 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 RESTQ13127 1097 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 PTGDRQ13258 359 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 PTK7Q13308 1070 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 EPHA7Q15375 998 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 FAM167AQ96KS9 214 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 NRBP2Q9NSY0 501 aa18.84■□□□□ 0.61
SF1-215ENST00000482693 IGSF9BQ9UPX0 1349 aa18.83■□□□□ 0.61
SF1-215ENST00000482693 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.6
SF1-215ENST00000482693 CYP2C9P11712 490 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 INSRRP14616 1297 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 ATP4AP20648 1035 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 PRPHP41219 470 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 PSMC5P62195 406 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 ADAM17P78536 824 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 HIC1Q14526 733 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 GRIK4Q16099 956 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 NCAPH2Q6IBW4 605 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 CCDC155Q8N6L0 562 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 LMBR1Q8WVP7 490 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 BBXQ8WY36 941 aaPredicted RBP18.83■□□□□ 0.6
SF1-215ENST00000482693 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 LBHD1Q9BQE6 289 aaPredicted RBP18.83■□□□□ 0.6
SF1-215ENST00000482693 NOC4LQ9BVI4 516 aaKnown RBP18.83■□□□□ 0.6
SF1-215ENST00000482693 HIPK3Q9H422 1215 aa18.83■□□□□ 0.6
SF1-215ENST00000482693 BMP15O95972 392 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
SF1-215ENST00000482693 QARSP47897 775 aaKnown RBP18.82■□□□□ 0.6
SF1-215ENST00000482693 ZNF200P98182 395 aaPredicted RBP18.82■□□□□ 0.6
SF1-215ENST00000482693 BFSP2Q13515 415 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 PDIA5Q14554 519 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 TMEM266Q2M3C6 531 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 ZNF484Q5JVG2 852 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 SERINC5Q86VE9 423 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 PDE4DIPQ5VU43 2346 aa18.82■□□□□ 0.6
SF1-215ENST00000482693 COL1A2P08123 1366 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 TREHO43280 583 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 ZNF862O60290 1169 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 OATP04181 439 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 TECP42680 631 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.64e-18■■□□□ 13.9
SF1-215ENST00000482693 UGCGQ16739 394 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 PRPF38BQ5VTL8 546 aaKnown RBP18.81■□□□□ 0.6
SF1-215ENST00000482693 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 BANK1Q8NDB2 785 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 CAGE1Q8TC20 777 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 NEK9Q8TD19 979 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 CEP131Q9UPN4 1083 aa18.81■□□□□ 0.6
SF1-215ENST00000482693 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms