RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 PBX4Q9BYU1 374 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 PPP1R12CQ9BZL4 782 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 WNT8AQ9H1J5 351 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 TTYH1Q9H313 450 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF576Q9H609 170 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 SLC28A3Q9HAS3 691 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 PGPEP1Q9NXJ5 209 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 THEGQ9P2T0 379 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 SLC4A7Q9Y6M7 1214 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
VPS13D-208ENST00000481484 TTC3P53804 2025 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ZBBXA8MT70 800 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ESPNB1AK53 854 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 hCG_1984214I3L0E3 225 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 WIPF1O43516 503 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 MYL3P08590 195 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CALM1P0DP23 149 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CALM2P0DP24 149 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CALM3P0DP25 149 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 PRKCSHP14314 528 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ATP2A2P16615 1042 aaKnown RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 SMARCA1P28370 1054 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CCND2P30279 289 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CYP2C18P33260 490 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 KCNJ6P48051 423 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 GNAQP50148 359 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 EPHB4P54760 987 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ARHGAP1Q07960 439 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 LAMC2Q13753 1193 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 WTAPQ15007 396 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 SEC23AQ15436 765 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 AAK1Q2M2I8 961 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 NBPF20Q3BBV1 942 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 FAM47CQ5HY64 1035 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ARHGEF16Q5VV41 709 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 B4GALNT3Q6L9W6 998 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CCDC62Q6P9F0 684 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CASC1Q6TDU7 716 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF365Q70YC5 407 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 EEPD1Q7L9B9 569 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CATIPQ7Z7H3 387 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ADGRF4Q8IZF3 695 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF713Q8N859 430 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CTCFLQ8NI51 663 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 MYLIPQ8WY64 445 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 CDHR1Q96JP9 859 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 PDCD2LQ9BRP1 358 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 EHMT1Q9H9B1 1298 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 PXMP2Q9NR77 195 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 PDGFCQ9NRA1 345 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 SEC63Q9UGP8 760 aaKnown RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ZNF215Q9UL58 517 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-208ENST00000481484 PCDHA1Q9Y5I3 950 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 MRVI1Q9Y6F6 885 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 ATG2AQ2TAZ0 1938 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 KIAA1671Q9BY89 1806 aa4.79□□□□□ -1.64
VPS13D-208ENST00000481484 GRIN2DO15399 1336 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PNMA6FA0A0J9YX94 578 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PALM3A6NDB9 673 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 KIF28PB7ZC32 967 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 KLRF2D3W0D1 207 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GCOM1H8Y6P7 765 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PIK3CDO00329 1044 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 IFIT3O14879 490 aaKnown RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 SGSM2O43147 1006 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GPR37L1O60883 481 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 UPP2O95045 317 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 ARIH2O95376 493 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 CFBP00751 764 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 CXCL10P02778 98 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 CYP21A2P08686 494 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 FBXO45P0C2W1 286 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 POLR2MP0CAP2 368 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GOLGA8HP0CJ92 632 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GNAT1P11488 350 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GSPT1P15170 499 aaKnown RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 SELPP16109 830 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 EIF2AK2P19525 551 aaKnown RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 UBA1P22314 1058 aaKnown RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 RCAN1P53805 252 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 SNAP25P60880 206 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PSMC6P62333 389 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 CBLBQ13191 982 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PTK7Q13308 1070 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 NEDD9Q14511 834 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 PTGISQ16647 500 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 TMEM67Q5HYA8 995 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 C6orf118Q5T5N4 469 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 RNF20Q5VTR2 975 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 CNKSR3Q6P9H4 555 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 METTL7BQ6UX53 244 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 STOX1Q6ZVD7 989 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 LRRC8DQ7L1W4 858 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 TMTC2Q8N394 836 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-208ENST00000481484 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 AFG1LQ8WV93 481 aa4.78□□□□□ -1.64
VPS13D-208ENST00000481484 ATXN2LQ8WWM7 1075 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms