RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SWAP70	Q9UH65	585 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SLC45A1	Q9Y2W3	748 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	WNT7A	O00755	349 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	FKTN	O75072	461 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCNE1	P24864	410 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	HNRNPH3	P31942	346 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EPHB4	P54760	987 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	BACE1	P56817	501 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	APBA1	Q02410	837 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TBC1D8B	Q0IIM8	1120 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	NNT	Q13423	1086 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GLE1	Q53GS7	698 aa	Known RBP	10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	FKBP15	Q5T1M5	1219 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TTI2	Q6NXR4	508 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	POTED	Q86YR6	584 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	BLID	Q8IZY5	108 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	C4orf32	Q8N8J7	132 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AK8	Q96MA6	479 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ALS2CR12	Q96Q35	445 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AS3MT	Q9HBK9	375 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	JADE2	Q9NQC1	790 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	HDAC6	Q9UBN7	1215 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	RNF14	Q9UBS8	474 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TRIM10	Q9UDY6	481 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SNX12	Q9UMY4	172 aa		10.06	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ABCB11	O95342	1321 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PES1	O00541	588 aa	Known RBP	10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	USP8	P40818	1118 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CAP1	Q01518	475 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	IL17A	Q16552	155 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ABCB5	Q2M3G0	1257 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	FOXR1	Q6PIV2	292 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	C17orf99	Q6UX52	265 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SRBD1	Q8N5C6	995 aa	Known RBP	10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCDC42	Q96M95	316 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SH3GL2	Q99962	352 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PCDHA4	Q9UN74	947 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AGTPBP1	Q9UPW5	1226 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AGPS	O00116	658 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	KLRC4	O43908	158 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	LCA5L	O95447	670 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	UBA7	P41226	1012 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CDK8	P49336	464 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GNAQ	P50148	359 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GTF2A1	P52655	376 aa	Predicted RBP	10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	HMGCS2	P54868	508 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	AMPD3	Q01432	767 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DGKZ	Q13574	1117 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MTMR2	Q13614	643 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TREML2	Q5T2D2	321 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	GADL1	Q6ZQY3	521 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CSGALNACT2	Q8N6G5	542 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DAGLB	Q8NCG7	672 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	RASSF8	Q8NHQ8	419 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	P2RX5	Q93086	422 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CAPZA3	Q96KX2	299 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	RUFY1	Q96T51	708 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CAPS2	Q9BXY5	557 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MCOLN1	Q9GZU1	580 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DEF6	Q9H4E7	631 aa		10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ZSWIM8	A7E2V4	1837 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	TRIM49B	A6NDI0	452 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	USP17L10	C9JJH3	530 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SRGAP2	O75044	1071 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	FGFR1OP	O95684	399 aa	Known RBP	10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PAFAH1B1	P43034	410 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	IRAK1	P51617	712 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SKOR1	P84550	965 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SP3	Q02447	781 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCDC178	Q5BJE1	867 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CTU1	Q7Z7A3	348 aa	Known RBP	10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PACS2	Q86VP3	889 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CAVIN3	Q969G5	261 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PLAGL2	Q9UPG8	496 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	HYOU1	Q9Y4L1	999 aa		10.04	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CCDC194	A0A1B0GVG4	234 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739		B4DLN1	442 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	C19orf81	C9J6K1	198 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EIF3H	O15372	352 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	HSF2BP	O75031	334 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	COBL	O75128	1261 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MYCN	P04198	464 aa	Predicted RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	BCR	P11274	1271 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	NAALADL2	Q58DX5	795 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MMS22L	Q6ZRQ5	1243 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	B4GALNT4	Q76KP1	1039 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CREG2	Q8IUH2	290 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	C12orf42	Q96LP6	360 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	PARK7	Q99497	189 aa	Known RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	NOC4L	Q9BVI4	516 aa	Known RBP	10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	EDEM3	Q9BZQ6	932 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	LACRT	Q9GZZ8	138 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	SH2D4A	Q9H788	454 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	MYH10	P35580	1976 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	hCG_1642624	A0A1W2PR95	340 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ZEB2	O60315	1214 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	ERLIN2	O94905	339 aa		10.03	□□□□□ -0.8
SH3YL1-222	ENST00000479739	CYP2C8	P10632	490 aa		10.03	□□□□□ -0.8

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