RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 RGL1Q9NZL6 768 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 KDM3AQ9Y4C1 1321 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 CENPFP49454 3210 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 IGKV6D-21A0A0A0MT36 114 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 MYADML2A6NDP7 307 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 CTAGE5O15320 804 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 MED24O75448 989 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
VHL-203ENST00000477538 HOXD8P13378 290 aaPredicted RBP18.15■□□□□ 0.5
VHL-203ENST00000477538 RPA1P27694 616 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 UBE2HP62256 183 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 NKX3-2P78367 333 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 CTTNQ14247 550 aaKnown RBP18.15■□□□□ 0.5
VHL-203ENST00000477538 ZRSR1Q15695 479 aaKnown RBP18.15■□□□□ 0.5
VHL-203ENST00000477538 UGCGQ16739 394 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 DGKDQ16760 1214 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 UTP14CQ5TAP6 766 aaKnown RBP18.15■□□□□ 0.5
VHL-203ENST00000477538 FAM160B1Q5W0V3 765 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 SWSAP1Q6NVH7 229 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 FSIP1Q8NA03 581 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 HSD17B14Q9BPX1 270 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 LXNQ9BS40 222 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 AZI2Q9H6S1 392 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 TUFT1Q9NNX1 390 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 ZNF302Q9NR11 478 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 LMBRD1Q9NUN5 540 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 GABBR1Q9UBS5 961 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 EMSYQ7Z589 1322 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 IGSF9BQ9UPX0 1349 aa18.15■□□□□ 0.5
VHL-203ENST00000477538 A0A1B0GVL5 298 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 POTEB3A0JP26 581 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 SLC26A4O43511 780 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 PPFIA4O75335 1185 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 LGR5O75473 907 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 LGALS2P05162 132 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 SPATA31C1P0DKV0 1188 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 PFKFB1P16118 471 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 CST5P28325 142 aaPredicted RBP18.14■□□□□ 0.49
VHL-203ENST00000477538 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
VHL-203ENST00000477538 PSMC5P62195 406 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 KARSQ15046 597 aaKnown RBP18.14■□□□□ 0.49
VHL-203ENST00000477538 GNASQ5JWF2 1037 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 POTEBQ6S5H4 581 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 CATSPER3Q86XQ3 398 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 TRIM50Q86XT4 487 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 TPH2Q8IWU9 490 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 ATP6V0A1Q93050 837 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 CDK5RAP3Q96JB5 506 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 DEFB118Q96PH6 123 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 PCYT2Q99447 389 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 CCDC39Q9UFE4 941 aa18.14■□□□□ 0.49
VHL-203ENST00000477538 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 ZEB2O60315 1214 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 DKC1O60832 514 aaKnown RBP eCLIP18.13■□□□□ 0.49
VHL-203ENST00000477538 SLITRK3O94933 977 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
VHL-203ENST00000477538 ZNF286BP0CG31 522 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 MUTP22033 750 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 STAT5BP51692 787 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 GRB10Q13322 594 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 HYIQ5T013 277 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 POTEGQ6S5H5 508 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 RNF180Q86T96 592 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 PDILTQ8N807 584 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 KLHDC9Q8NEP7 349 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 AFAP1L1Q8TED9 768 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 GLG1Q92896 1179 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 NT5C3AQ9H0P0 336 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 GOLPH3LQ9H4A5 285 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 ZSWIM4Q9H7M6 989 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 KCNH3Q9ULD8 1083 aa18.13■□□□□ 0.49
VHL-203ENST00000477538 FAM237AA0A1B0GTK4 181 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 MYL3P08590 195 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 LRRC41Q15345 812 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 ECM1Q16610 540 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 TMEM119Q4V9L6 283 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 PDXDC2PQ6P474 469 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 PLPPR4Q7Z2D5 763 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 PLIN2Q99541 437 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
VHL-203ENST00000477538 WRAP73Q9P2S5 460 aaPredicted RBP18.12■□□□□ 0.49
VHL-203ENST00000477538 KIAA1024Q9UPX6 916 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 HPSEQ9Y251 543 aa18.12■□□□□ 0.49
VHL-203ENST00000477538 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
VHL-203ENST00000477538 A0A087X0B3 334 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 ZNF862O60290 1169 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 KPNA6O60684 536 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 PLCG1P19174 1290 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 NDUFA8P51970 172 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 PURAQ00577 322 aaKnown RBP18.11■□□□□ 0.49
VHL-203ENST00000477538 PRKCEQ02156 737 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 KCNA10Q16322 511 aa18.11■□□□□ 0.49
VHL-203ENST00000477538 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms