RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 NKX2-4Q9H2Z4 354 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 NCOA5Q9HCD5 579 aaKnown RBP10.76□□□□□ -0.69
PDPN-204ENST00000475043 C6orf50Q9HD87 102 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 KCNH7Q9NS40 1196 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 COL6A3P12111 3177 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 NID2Q14112 1375 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 TREHO43280 583 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 BAIAP3O94812 1187 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 MYOGP15173 224 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 MARK3P27448 753 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 SREBF1P36956 1147 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 KCNJ6P48051 423 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 CLK2P49760 499 aaKnown RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 ARHGAP4P98171 946 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 RBL2Q08999 1139 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 STK3Q13188 491 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 TOB2Q14106 344 aaPredicted RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 PKN1Q16512 942 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 CEP55Q53EZ4 464 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 MAFAQ8NHW3 353 aaPredicted RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 SDF4Q9BRK5 362 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 RNF26Q9BY78 433 aaPredicted RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 ZMYND12Q9H0C1 365 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 ERAP1Q9NZ08 941 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 SLC9A2Q9UBY0 812 aa10.75□□□□□ -0.69
PDPN-204ENST00000475043 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
PDPN-204ENST00000475043 PTPRSQ13332 1948 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 GSTTP1A0A1W2PQM5 241 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 ESYT2A0FGR8 921 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 RSPH10B2B2RC85 870 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 CPLX1O14810 134 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 NBNO60934 754 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 CTSHP09668 335 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 RSPH10BP0C881 870 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 ARP10275 920 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 IFNAR1P17181 557 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 GNA11P29992 359 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 EVCP57679 992 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 GPNMBQ14956 572 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 NTRK3Q16288 839 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 TRIM71Q2Q1W2 868 aaKnown RBP10.74□□□□□ -0.69
PDPN-204ENST00000475043 CNKSR3Q6P9H4 555 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 REXO1Q8N1G1 1221 aaKnown RBP10.74□□□□□ -0.69
PDPN-204ENST00000475043 CCDC148Q8NFR7 591 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 TET1Q8NFU7 2136 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 LMBR1Q8WVP7 490 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 GAS2L1Q99501 681 aaPredicted RBP10.74□□□□□ -0.69
PDPN-204ENST00000475043 TM6SF1Q9BZW5 370 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 SMARCAD1Q9H4L7 1026 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 PRDM12Q9H4Q4 367 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 AZI2Q9H6S1 392 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 VPS54Q9P1Q0 977 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
PDPN-204ENST00000475043 KIF28PB7ZC32 967 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 RBAK-RBAKDNI3L0D1 243 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 DDX39AO00148 427 aaKnown RBP10.73□□□□□ -0.69
PDPN-204ENST00000475043 MEIS1O00470 390 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 ADAMTS3O15072 1205 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 CXCL10P02778 98 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 HOXC8P31273 242 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 SSRP1Q08945 709 aaKnown RBP10.73□□□□□ -0.69
PDPN-204ENST00000475043 IKBKEQ14164 716 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 MCTP2Q6DN12 878 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
PDPN-204ENST00000475043 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 HERC6Q8IVU3 1022 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 PHOSPHO2Q8TCD6 241 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 BICD2Q8TD16 824 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 ZNF274Q96GC6 653 aaPredicted RBP10.73□□□□□ -0.69
PDPN-204ENST00000475043 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 AGO4Q9HCK5 861 aaKnown RBP10.73□□□□□ -0.69
PDPN-204ENST00000475043 NFASCO94856 1347 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 EMSYQ7Z589 1322 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 NRCAMQ92823 1304 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 CDH23Q9H251 3354 aa10.73□□□□□ -0.69
PDPN-204ENST00000475043 ABHD14A-ACY1A0A1B0GW23 586 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 FAM86B1E9PN63 330 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 TLL1O43897 1013 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 LGR5O75473 907 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 CA3P07451 260 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 FAM86B2P0C5J1 330 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 IGFBP4P22692 258 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 NLRP5P59047 1200 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 ACTR2P61160 394 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 WDR5P61964 334 aaKnown RBP10.72□□□□□ -0.69
PDPN-204ENST00000475043 IGBP1P78318 339 aa10.72□□□□□ -0.69
PDPN-204ENST00000475043 DEFB103AP81534 67 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms