RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 PATE3B3GLJ2 98 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 ATP2B1P20020 1258 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 GUCY1A3Q02108 690 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 DBPQ10586 325 aaPredicted RBP5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 USP10Q14694 798 aaKnown RBP5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 CRY1Q16526 586 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 USP51Q70EK9 711 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 SPATC1Q76KD6 591 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 REXO1L1PQ8IX06 675 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 PALM2Q8IXS6 379 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 ZBTB38Q8NAP3 1195 aaPredicted RBP5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 SLC16A11Q8NCK7 471 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 CCDC113Q9H0I3 377 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 SLC39A2Q9NP94 309 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 PCDHA8Q9Y5H6 950 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 SLC4A7Q9Y6M7 1214 aa5.42□□□□□ -1.54
PRPF40A-207ENST00000471701 ESYT3A0FGR9 886 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 CCDC85CA6NKD9 419 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 MUSKO15146 869 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 CUTAO60888 179 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 IL18BPO95998 194 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 AMHP03971 560 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 C6P13671 934 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 PTPN1P18031 435 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 POLD1P28340 1107 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 CSF2RBP32927 897 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 SELENOPP49908 381 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 ZC3H6P61129 1189 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 SUMO1P63165 101 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 SSRP1Q08945 709 aaKnown RBP5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 RASGRF1Q13972 1273 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 C16orf59Q7L2K0 433 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 GPR155Q7Z3F1 870 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 OSTM1Q86WC4 334 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 WDR48Q8TAF3 677 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 Q8TCH9 128 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 GNRHR2Q96P88 292 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 LRRC37BQ96QE4 947 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 KATNBL1Q9H079 304 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 ATP23Q9Y6H3 246 aa5.41□□□□□ -1.54
PRPF40A-207ENST00000471701 TCRBV5S4A2TA0A5A2 114 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 SRGAP2CP0DJJ0 459 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 PYGMP11217 842 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 KRT15P19012 456 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 GABREP78334 506 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 WDR72Q3MJ13 1102 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 NAALADL2Q58DX5 795 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 FAM47CQ5HY64 1035 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 FAM209AQ5JX71 171 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 TAX1BP1Q86VP1 789 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 SH3RF2Q8TEC5 729 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 VPS11Q9H270 941 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 SIRPGQ9P1W8 387 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 MSRB2Q9Y3D2 182 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 TESMINQ9Y4I5 508 aa5.4□□□□□ -1.54
PRPF40A-207ENST00000471701 FAM90A27PA6NNH2 459 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 PDE6AP16499 860 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 TACR2P21452 398 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 GJA4P35212 333 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 RAC3P60763 192 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 CDSNQ15517 529 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 ZMAT1Q5H9K5 638 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 NBPF6Q5VWK0 638 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 ZC3H7AQ8IWR0 971 aaKnown RBP5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 PCDH19Q8TAB3 1148 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 SCYL1Q96KG9 808 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 NBPF4Q96M43 638 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 DHRS4Q9BTZ2 278 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 TANGO6Q9C0B7 1094 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 MEGF9Q9H1U4 602 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 SRPK3Q9UPE1 567 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 ZFR2Q9UPR6 939 aaKnown RBP5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 PCDHA9Q9Y5H5 950 aa5.39□□□□□ -1.55
PRPF40A-207ENST00000471701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 WNT9AO14904 365 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 FZD7O75084 574 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 DNM2P50570 870 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 PRKD1Q15139 912 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 TCTN3Q6NUS6 607 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 CXXC5Q7LFL8 322 aaKnown RBP5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 PTRH1Q86Y79 214 aaKnown RBP5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 NEIL1Q96FI4 390 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 WWC2-AS2Q96NR7 200 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 SORCS2Q96PQ0 1159 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 GALNT8Q9NY28 637 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 KDM2BQ8NHM5 1336 aa5.38□□□□□ -1.55
PRPF40A-207ENST00000471701 FOXS1O43638 330 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 ADCY3O60266 1144 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 AMY2AP04746 511 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 FAM153BP0C7A2 387 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 ZNF888P0CJ79 500 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 AMY2BP19961 511 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 PTGS1P23219 599 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 GTF2F1P35269 517 aaKnown RBP eCLIP5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 HMGA2P52926 109 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 JAM2P57087 298 aa5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 TOP3AQ13472 1001 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-207ENST00000471701 LONRF2Q1L5Z9 754 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms