RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 X6R8D5 127 aa8.46□□□□□ -1.06
SMC5-202ENST00000471372 A6NNZ2 444 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
SMC5-202ENST00000471372 FUCA1P04066 466 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 PHKG2P15735 406 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 CD40P25942 277 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 SERPINB3P29508 390 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 USP14P54578 494 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 TMEM132BQ14DG7 1078 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 FIGNQ5HY92 759 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 EP400NLQ6ZTU2 488 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 CATIPQ7Z7H3 387 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 FAM9AQ8IZU1 332 aaPredicted RBP8.45□□□□□ -1.06
SMC5-202ENST00000471372 PLEKHO2Q8TD55 490 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 TTC17Q96AE7 1141 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 MKNK2Q9HBH9 465 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 ATP13A1Q9HD20 1204 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 PTPRHQ9HD43 1115 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 C1orf112Q9NSG2 853 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 DSEQ9UL01 958 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 COA3Q9Y2R0 106 aaPredicted RBP8.45□□□□□ -1.06
SMC5-202ENST00000471372 RWDD3Q9Y3V2 267 aa8.45□□□□□ -1.06
SMC5-202ENST00000471372 PMM2O15305 246 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 CLASP2O75122 1294 aaKnown RBP8.44□□□□□ -1.06
SMC5-202ENST00000471372 OFD1O75665 1012 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 DGKIO75912 1065 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 FOSP01100 380 aaPredicted RBP8.44□□□□□ -1.06
SMC5-202ENST00000471372 CYP17A1P05093 508 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 FURINP09958 794 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 OSMP13725 252 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 AGXTP21549 392 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 C5AR1P21730 350 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 AKAP5P24588 427 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 TOR2AQ5JU69 321 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 CC2D1AQ6P1N0 951 aaPredicted RBP8.44□□□□□ -1.06
SMC5-202ENST00000471372 TMPRSS7Q7RTY8 843 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 C11orf96Q7Z7L8 435 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMC5-202ENST00000471372 ACAP3Q96P50 834 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 SEMA4AQ9H3S1 761 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 SLC6A20Q9NP91 592 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 FBLN5Q9UBX5 448 aa8.44□□□□□ -1.06
SMC5-202ENST00000471372 CCDC189A1A4V9 331 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 HTR3AP46098 478 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 FXR1P51114 621 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMC5-202ENST00000471372 CT83Q5H943 113 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 RBM12BQ8IXT5 1001 aaKnown RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 ZZZ3Q8IYH5 903 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 UHMK1Q8TAS1 419 aaKnown RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 PARD3BQ8TEW8 1205 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 ELAC2Q9BQ52 826 aaKnown RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 MTA3Q9BTC8 594 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 GTPBP4Q9BZE4 634 aaKnown RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 QRSL1Q9H0R6 528 aaKnown RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 LRRC4CQ9HCJ2 640 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 ZNF277Q9NRM2 450 aaPredicted RBP8.43□□□□□ -1.06
SMC5-202ENST00000471372 KCNH7Q9NS40 1196 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 EDARQ9UNE0 448 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 GPR45Q9Y5Y3 372 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 ATP23Q9Y6H3 246 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 PITPNM2Q9BZ72 1349 aa8.43□□□□□ -1.06
SMC5-202ENST00000471372 PPFIA4O75335 1185 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 CLEC2LP0C7M8 214 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 ENPP1P22413 925 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 MTNR1BP49286 362 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 FSCN1Q16658 493 aaKnown RBP8.42□□□□□ -1.06
SMC5-202ENST00000471372 LILRA6Q6PI73 481 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 CHST15Q7LFX5 561 aaPredicted RBP8.42□□□□□ -1.06
SMC5-202ENST00000471372 PLD6Q8N2A8 252 aaKnown RBP8.42□□□□□ -1.06
SMC5-202ENST00000471372 ZBTB34Q8NCN2 500 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 ACO2Q99798 780 aaKnown RBP8.42□□□□□ -1.06
SMC5-202ENST00000471372 ANO3Q9BYT9 981 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 RNF38Q9H0F5 515 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 CSRNP2Q9H175 543 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC5-202ENST00000471372 SERPINB13Q9UIV8 391 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 PHTF1Q9UMS5 762 aa8.42□□□□□ -1.06
SMC5-202ENST00000471372 FADS2P1A8MWK0 482 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 C1QTNF9BB2RNN3 333 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 MYL3P08590 195 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 ADKP55263 362 aaKnown RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 ZNF280AP59817 542 aaPredicted RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 MOGSQ13724 837 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 ZRSR2Q15696 482 aaKnown RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 ATAT1Q5SQI0 421 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 CATSPEREQ5SY80 951 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 RNF43Q68DV7 783 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 CXorf67Q86X51 503 aaPredicted RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 SIRT2Q8IXJ6 389 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 NLGN4XQ8N0W4 816 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 MIER2Q8N344 545 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 HPS3Q969F9 1004 aa8.41□□□□□ -1.06
SMC5-202ENST00000471372 EAF2Q96CJ1 260 aaPredicted RBP8.41□□□□□ -1.06
SMC5-202ENST00000471372 PPCSQ9HAB8 311 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms