RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TMEM60Q9H2L4 133 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 NRBP2Q9NSY0 501 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 PPME1Q9Y570 386 aa14.2□□□□□ -0.14
SPTLC1-204ENST00000469778 NRCAMQ92823 1304 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 RRN3P2A6NIE6 340 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 DDX39AO00148 427 aaKnown RBP14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 WNT7AO00755 349 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 YEATS4O95619 227 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 NASPP49321 788 aaPredicted RBP14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 PSMC5P62195 406 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 HAUS3Q68CZ6 603 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 PDXDC2PQ6P474 469 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 EXOC8Q8IYI6 725 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 IGSF22Q8N9C0 903 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 HSD17B14Q9BPX1 270 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 ZSWIM4Q9H7M6 989 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 TUFT1Q9NNX1 390 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 LRWD1Q9UFC0 647 aa14.19□□□□□ -0.14
SPTLC1-204ENST00000469778 DCDC2CA8MYV0 355 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 TLR3O15455 904 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 HBP1O60381 514 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 PPP6R2O75170 966 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 LYPLA2O95372 231 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 PTGS1P23219 599 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 LONP1P36776 959 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 TECP42680 631 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 PKP1Q13835 747 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 PTPAQ15257 358 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 NBPF20Q3BBV1 942 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 ZNF484Q5JVG2 852 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 C4orf19Q8IY42 314 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 KCNG4Q8TDN1 519 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 DIS3LQ8TF46 1054 aaKnown RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 ATP8B4Q8TF62 1192 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 PCYT2Q99447 389 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 POLR3CQ9BUI4 534 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 GABBR1Q9UBS5 961 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 ZDHHC9Q9Y397 364 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 FRMPD3Q5JV73 1810 aa14.18□□□□□ -0.14
SPTLC1-204ENST00000469778 POTEB3A0JP26 581 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 CHMP2AO43633 222 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 SORBS3O60504 671 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 ZNF286BP0CG31 522 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 RPA1P27694 616 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 KRT85P78386 507 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 NBR1Q14596 966 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 KRT79Q5XKE5 535 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 NCAPH2Q6IBW4 605 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 POTEBQ6S5H4 581 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 CKAP2LQ8IYA6 745 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 ZNF710Q8N1W2 664 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 LINC00301Q8NCQ3 95 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 USP28Q96RU2 1077 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 NIFKQ9BYG3 293 aaKnown RBP14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 CHMP5Q9NZZ3 219 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 SRPRBQ9Y5M8 271 aaKnown RBP14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 CLIC4Q9Y696 253 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 COL1A2P08123 1366 aa14.17□□□□□ -0.14
SPTLC1-204ENST00000469778 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 IGSF9BQ9UPX0 1349 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 EML1O00423 815 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 SLITRK3O94933 977 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 HOXC8P31273 242 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 STK38Q15208 465 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 KRI1Q8N9T8 703 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 GJA10Q969M2 543 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 UIMC1Q96RL1 719 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 EIF2AK1Q9BQI3 630 aaKnown RBP14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 JPH2Q9BR39 696 aaPredicted RBP14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 RNPEPQ9H4A4 650 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 GTF2IRD1Q9UHL9 959 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 RCOR1Q9UKL0 485 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 NR2E3Q9Y5X4 410 aa14.16□□□□□ -0.14
SPTLC1-204ENST00000469778 SCN10AQ9Y5Y9 1956 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 SPTLC2O15270 562 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 MAGEB2O15479 319 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 OATP04181 439 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 SMIM10L2AP0DMW4 78 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 SMIM10L2BP0DMW5 78 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 UBA7P41226 1012 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 PSMC6P62333 389 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 PPFIA1Q13136 1202 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 FAM173BQ6P4H8 233 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 NACC1Q96RE7 527 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 NT5C3AQ9H0P0 336 aa14.15□□□□□ -0.14
SPTLC1-204ENST00000469778 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms