RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 NOSTRINQ8IVI9 506 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 MBOAT7Q96N66 472 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 NOC4LQ9BVI4 516 aaKnown RBP13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 DISC1Q9NRI5 854 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 GABBR1Q9UBS5 961 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 PCDHA10Q9Y5I2 948 aa13.59□□□□□ -0.23
SHROOM3-202ENST00000466541 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 WDR64B1ANS9 1081 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 TREHO43280 583 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 LGR5O75473 907 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 NBR1Q14596 966 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 CALCRLQ16602 461 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 RETREG2Q8NC44 543 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 ZBTB10Q96DT7 871 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 SCLYQ96I15 445 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 RIT2Q99578 217 aa13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 NOL7Q9UMY1 257 aaKnown RBP13.58□□□□□ -0.24
SHROOM3-202ENST00000466541 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 NEMFO60524 1076 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 PSMD10O75832 226 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 ATG7O95352 703 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 ACRP10323 421 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 GNAT1P11488 350 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 CSF2RAP15509 400 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 THPOP40225 353 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 TXKP42681 527 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 FPGSQ05932 587 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 BFSP2Q13515 415 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 PLCB4Q15147 1175 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 GRIK4Q16099 956 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 TTC38Q5R3I4 469 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 NCAPH2Q6IBW4 605 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 PLPPR4Q7Z2D5 763 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 SESTD1Q86VW0 696 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 SMAP1Q8IYB5 467 aaPredicted RBP13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 HAS1Q92839 578 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 SNX21Q969T3 373 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 FAM20AQ96MK3 541 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 GDF15Q99988 308 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 EMSYQ7Z589 1322 aa13.57□□□□□ -0.24
SHROOM3-202ENST00000466541 TRIOBPQ9H2D6 2365 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 INSRRP14616 1297 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 SFNP31947 248 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 JAK3P52333 1124 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 EPHB4P54760 987 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 PTK7Q13308 1070 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 UGCGQ16739 394 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 FERMT3Q86UX7 667 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 CCDC155Q8N6L0 562 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 DHX38Q92620 1227 aaKnown RBP13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 WNT8BQ93098 351 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 WNT8AQ9H1J5 351 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 TMEM60Q9H2L4 133 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
SHROOM3-202ENST00000466541 RANBP2P49792 3224 aaKnown RBP13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 EML1O00423 815 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 CTSHP09668 335 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 ATP4AP20648 1035 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 U2AF2P26368 475 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 PPIGQ13427 754 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 RUFY4Q6ZNE9 571 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 SLFN12Q8IYM2 578 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 FAM49AQ9H0Q0 323 aaPredicted RBP13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 EVPLQ92817 2033 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 NRCAMQ92823 1304 aa13.55□□□□□ -0.24
SHROOM3-202ENST00000466541 TBX3O15119 743 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 CKBP12277 381 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 PDCP20941 246 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 TOB1P50616 345 aaPredicted RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 PRKCEQ02156 737 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 AFAP1L1Q8TED9 768 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 TNPO1Q92973 898 aaKnown RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 SH2D3AQ9BRG2 576 aa13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
SHROOM3-202ENST00000466541 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms