RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 DNERQ8NFT8 737 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 TACO1Q9BSH4 297 aaKnown RBP6.48□□□□□ -1.37
ITGB1-208ENST00000464001 HIRIP3Q9BW71 556 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-208ENST00000464001 KLC2Q9H0B6 622 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 SEC61A2Q9H9S3 476 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 RIC8BQ9NVN3 520 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 SRPK3Q9UPE1 567 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 TSC22D4Q9Y3Q8 395 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 PCDHA8Q9Y5H6 950 aa6.48□□□□□ -1.37
ITGB1-208ENST00000464001 IL18BPO95998 194 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 APPP05067 770 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 PTPN1P18031 435 aaKnown RBP6.47□□□□□ -1.37
ITGB1-208ENST00000464001 CSF2RBP32927 897 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 GABREP78334 506 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 ST5P78524 1137 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 ZXDAP98168 799 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 C16orf59Q7L2K0 433 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 PCDH19Q8TAB3 1148 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 PTPN18Q99952 460 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 DHRS4Q9BTZ2 278 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 SLC39A2Q9NP94 309 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 ARHGAP28Q9P2N2 729 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 ATP23Q9Y6H3 246 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 SLC4A7Q9Y6M7 1214 aa6.47□□□□□ -1.37
ITGB1-208ENST00000464001 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
ITGB1-208ENST00000464001 CNOT4O95628 575 aaKnown RBP6.46□□□□□ -1.38
ITGB1-208ENST00000464001 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-208ENST00000464001 FAM153BP0C7A2 387 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 GJA4P35212 333 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 USP10Q14694 798 aaKnown RBP6.46□□□□□ -1.38
ITGB1-208ENST00000464001 CRY1Q16526 586 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 ZNF568Q3ZCX4 644 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 FAM47CQ5HY64 1035 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 OSTM1Q86WC4 334 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 KATNBL1Q9H079 304 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 TCAF1Q9Y4C2 921 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 KDM2BQ8NHM5 1336 aa6.46□□□□□ -1.38
ITGB1-208ENST00000464001 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 ARVCFO00192 962 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 MAN2B1O00754 1011 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 CUTAO60888 179 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 ZNF623O75123 536 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 SRGAP2CP0DJJ0 459 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 PYGMP11217 842 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 PDE6AP16499 860 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 POLD1P28340 1107 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 GTF2F1P35269 517 aaKnown RBP eCLIP6.45□□□□□ -1.38
ITGB1-208ENST00000464001 FIGNQ5HY92 759 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 ZC3H12BQ5HYM0 836 aaKnown RBP6.45□□□□□ -1.38
ITGB1-208ENST00000464001 GPR155Q7Z3F1 870 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 LRP10Q7Z4F1 713 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 PTRH1Q86Y79 214 aaKnown RBP6.45□□□□□ -1.38
ITGB1-208ENST00000464001 SH3RF3Q8TEJ3 882 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-208ENST00000464001 CARD11Q9BXL7 1154 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 MEGF9Q9H1U4 602 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 SEMA4AQ9H3S1 761 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 PCDHA9Q9Y5H5 950 aa6.45□□□□□ -1.38
ITGB1-208ENST00000464001 AMY2AP04746 511 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 KRT15P19012 456 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 AMY2BP19961 511 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 HS1BP3Q53T59 392 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 ZNF585AQ6P3V2 769 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 NPM2Q86SE8 214 aaKnown RBP6.44□□□□□ -1.38
ITGB1-208ENST00000464001 ZC3H7AQ8IWR0 971 aaKnown RBP6.44□□□□□ -1.38
ITGB1-208ENST00000464001 ARMC5Q96C12 935 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 EXOC2Q96KP1 924 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 LMF1Q96S06 567 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 CBLCQ9ULV8 474 aa6.44□□□□□ -1.38
ITGB1-208ENST00000464001 MRPS23Q9Y3D9 190 aaKnown RBP6.44□□□□□ -1.38
ITGB1-208ENST00000464001 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-208ENST00000464001 ESYT3A0FGR9 886 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 CRTAMO95727 393 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 SELENOPP49908 381 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 DNM2P50570 870 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 JAM2P57087 298 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 CDSNQ15517 529 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 SPRED1Q7Z699 444 aa6.43□□□□□ -1.38
ITGB1-208ENST00000464001 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-208ENST00000464001 CCDC66A2RUB6 948 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 EFCAB14O75071 495 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 CLASP2O75122 1294 aaKnown RBP6.42□□□□□ -1.38
ITGB1-208ENST00000464001 ZNF888P0CJ79 500 aaPredicted RBP6.42□□□□□ -1.38
ITGB1-208ENST00000464001 PTGS1P23219 599 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 HERVK_113P62684 666 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 LACTBP83111 547 aaPredicted RBP6.42□□□□□ -1.38
ITGB1-208ENST00000464001 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
ITGB1-208ENST00000464001 WDR72Q3MJ13 1102 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 CXXC5Q7LFL8 322 aaKnown RBP6.42□□□□□ -1.38
ITGB1-208ENST00000464001 Q8TCH9 128 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 SCYL1Q96KG9 808 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 GNRHR2Q96P88 292 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 LRRC37BQ96QE4 947 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 INCENPQ9NQS7 918 aa6.42□□□□□ -1.38
ITGB1-208ENST00000464001 GALNT8Q9NY28 637 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms