RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 CCDC60Q8IWA6 550 aaPredicted RBP11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 FAM126BQ8IXS8 530 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 RDM1Q8NG50 284 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 ATP6V0A1Q93050 837 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 TOX2Q96NM4 488 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 PDLIM7Q9NR12 457 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 HDAC6Q9UBN7 1215 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 GABBR1Q9UBS5 961 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 GRIN2DO15399 1336 aa11.29□□□□□ -0.6
GPATCH4-204ENST00000463513 HAS3O00219 553 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 WNT7AO00755 349 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 B4GALT4O60513 344 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 LGR5O75473 907 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 RAG1P15918 1043 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 CDK7P50613 346 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 IGBP1P78318 339 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 PPP2R5CQ13362 524 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 ABHD15Q6UXT9 468 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 PLPPR4Q7Z2D5 763 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 TRMT1LQ7Z2T5 733 aaKnown RBP11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 SLC43A3Q8NBI5 491 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 RAB34Q9BZG1 259 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 TTC12Q9H892 705 aaPredicted RBP11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 VAV3Q9UKW4 847 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 CEP131Q9UPN4 1083 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 IGSF9BQ9UPX0 1349 aa11.28□□□□□ -0.6
GPATCH4-204ENST00000463513 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 H0YGN5 161 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 LAD1O00515 517 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 BMP15O95972 392 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 PRKCEQ02156 737 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 GRIK4Q16099 956 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 SESTD1Q86VW0 696 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 ERMNQ8TAM6 284 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 AFAP1L1Q8TED9 768 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 HAS1Q92839 578 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 TMEM60Q9H2L4 133 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 HIPK3Q9H422 1215 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 MTMR6Q9Y217 621 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
GPATCH4-204ENST00000463513 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 ATG7O95352 703 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 OATP04181 439 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 CYP2C9P11712 490 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 RESTQ13127 1097 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 PTGDRQ13258 359 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 BFSP2Q13515 415 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 PLCB4Q15147 1175 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 RETREG2Q8NC44 543 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 ATP8B4Q8TF62 1192 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 LMBR1Q8WVP7 490 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 PCYT2Q99447 389 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 RNPEPQ9H4A4 650 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 SETD4Q9NVD3 440 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 TBX21Q9UL17 535 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 TRIOBPQ9H2D6 2365 aa11.26□□□□□ -0.61
GPATCH4-204ENST00000463513 RANBP2P49792 3224 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 IGKV6D-21A0A0A0MT36 114 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 POTEMA6NI47 508 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 RRN3P2A6NIE6 340 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 HBP1O60381 514 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 CD4P01730 458 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 INSRRP14616 1297 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 TECP42680 631 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 PSMC5P62195 406 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 CYP4A11Q02928 519 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 PTK7Q13308 1070 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 EPHA7Q15375 998 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 UGCGQ16739 394 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 SH3RF1Q7Z6J0 888 aa11.25□□□□□ -0.61
GPATCH4-204ENST00000463513 RSPH3Q86UC2 560 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms