RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 DDX46Q7L014 1031 aaKnown RBP5.27□□□□□ -1.57
CLK1-206ENST00000461326 FGD2Q7Z6J4 655 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 CCDC103Q8IW40 242 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 RPUSD2Q8IZ73 545 aaKnown RBP5.27□□□□□ -1.57
CLK1-206ENST00000461326 AFAP1L2Q8N4X5 818 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 RXFP1Q9HBX9 757 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 TRAF6Q9Y4K3 522 aa5.27□□□□□ -1.57
CLK1-206ENST00000461326 ASXL2Q76L83 1435 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 BRINP1O60477 761 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 NPHS1O60500 1241 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 RASGRP1O95267 797 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 JMJD7P0C870 316 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 CFAP100Q494V2 611 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 KCNT2Q6UVM3 1135 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 LIMS2Q7Z4I7 341 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 NECAB2Q7Z6G3 386 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 ZC3H7AQ8IWR0 971 aaKnown RBP5.26□□□□□ -1.57
CLK1-206ENST00000461326 LZTR1Q8N653 840 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 DDX11Q96FC9 970 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 ZNF747Q9BV97 191 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 CELF4Q9BZC1 486 aaKnown RBP5.26□□□□□ -1.57
CLK1-206ENST00000461326 PCED1AQ9H1Q7 454 aa5.26□□□□□ -1.57
CLK1-206ENST00000461326 DDX56Q9NY93 547 aaKnown RBP5.26□□□□□ -1.57
CLK1-206ENST00000461326 TIMM13Q9Y5L4 95 aaPredicted RBP5.26□□□□□ -1.57
CLK1-206ENST00000461326 FAM47E-STBD1D6RA91 191 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 H7BY64 318 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 RAB11FIP3O75154 756 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 GRK2P25098 689 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 THBS2P35442 1172 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 GRK3P35626 688 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 LSAMPQ13449 338 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 ZNF460Q14592 562 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 PLEKHH3Q7Z736 793 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 Q8N1Y9 231 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 RCBTB1Q8NDN9 531 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 OR2W6PQ8NHA6 318 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 WNK4Q96J92 1243 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 CEP89Q96ST8 783 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 KLC2Q9H0B6 622 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 HOMER2Q9NSB8 354 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 TMEFF2Q9UIK5 374 aaPredicted RBP5.25□□□□□ -1.57
CLK1-206ENST00000461326 APOBEC2Q9Y235 224 aaKnown RBP5.25□□□□□ -1.57
CLK1-206ENST00000461326 PCDHA9Q9Y5H5 950 aa5.25□□□□□ -1.57
CLK1-206ENST00000461326 C7orf72A4D263 438 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 FAM83GA6ND36 823 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 LAMTOR5O43504 91 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 ZEB2O60315 1214 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 KPNA6O60684 536 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 SOD2P04179 222 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 OCRLQ01968 901 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 SART3Q15020 963 aaKnown RBP5.24□□□□□ -1.57
CLK1-206ENST00000461326 CDSNQ15517 529 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 PIK3R6Q5UE93 754 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 CDCA2Q69YH5 1023 aaPredicted RBP5.24□□□□□ -1.57
CLK1-206ENST00000461326 PRPF38AQ8NAV1 312 aaKnown RBP5.24□□□□□ -1.57
CLK1-206ENST00000461326 KYQ8NBH2 561 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 LEO1Q8WVC0 666 aaPredicted RBP5.24□□□□□ -1.57
CLK1-206ENST00000461326 TTC1Q99614 292 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 C11orf84Q9BUA3 381 aaPredicted RBP5.24□□□□□ -1.57
CLK1-206ENST00000461326 CABP5Q9NP86 173 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 SAMD15Q9P1V8 674 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 PCDHA8Q9Y5H6 950 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
CLK1-206ENST00000461326 GAS7O60861 476 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 PDGFRBP09619 1106 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 POU3F3P20264 500 aaPredicted RBP5.23□□□□□ -1.57
CLK1-206ENST00000461326 SCNN1BP51168 640 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 ST5P78524 1137 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 EXOSC10Q01780 885 aaKnown RBP5.23□□□□□ -1.57
CLK1-206ENST00000461326 INF2Q27J81 1249 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 RNF219Q5W0B1 726 aaPredicted RBP5.23□□□□□ -1.57
CLK1-206ENST00000461326 MCTP2Q6DN12 878 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 C16orf59Q7L2K0 433 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 DDX42Q86XP3 938 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLK1-206ENST00000461326 TTLL6Q8N841 843 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 ATL2Q8NHH9 583 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 PCDH19Q8TAB3 1148 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 USP7Q93009 1102 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 FBXW5Q969U6 566 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 TMEM169Q96HH4 297 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 LCORQ96JN0 433 aaPredicted RBP5.23□□□□□ -1.57
CLK1-206ENST00000461326 SCYL1Q96KG9 808 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 GORASP1Q9BQQ3 440 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 IFT22Q9H7X7 185 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLK1-206ENST00000461326 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLK1-206ENST00000461326 RWDD3Q9Y3V2 267 aa5.23□□□□□ -1.57
CLK1-206ENST00000461326 CBX4O00257 560 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 ARNTLO00327 626 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 MSCO60682 206 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 EYA4O95677 639 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 AMHP03971 560 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 S100BP04271 92 aaPredicted RBP5.22□□□□□ -1.57
CLK1-206ENST00000461326 C8BP07358 591 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 LCP1P13796 627 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 ARHGAP44Q17R89 818 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 TMEM177Q53S58 311 aa5.22□□□□□ -1.57
CLK1-206ENST00000461326 MBLAC2Q68D91 279 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms