RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 KCNMB3Q9NPA1 279 aa20.77■□□□□ 0.92
DDR1-241ENST00000460944 ZNF302Q9NR11 478 aa20.77■□□□□ 0.92
DDR1-241ENST00000460944 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
DDR1-241ENST00000460944 IGKV6D-21A0A0A0MT36 114 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 KIF28PB7ZC32 967 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 NEMFO60524 1076 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 U2AF2P26368 475 aaKnown RBP eCLIP20.76■□□□□ 0.91
DDR1-241ENST00000460944 TRAPPC10P48553 1259 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 PPFIA1Q13136 1202 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 BFSP2Q13515 415 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 CALCRLQ16602 461 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 SWSAP1Q6NVH7 229 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 MIER3Q7Z3K6 550 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
DDR1-241ENST00000460944 TMEM199Q8N511 208 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 AFAP1L1Q8TED9 768 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 GDF15Q99988 308 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 UNC45AQ9H3U1 944 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 RNPEPQ9H4A4 650 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 PCDH10Q9P2E7 1040 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 TRPC6Q9Y210 931 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
DDR1-241ENST00000460944 HSP90AA1P07900 732 aaKnown RBP20.75■□□□□ 0.91
DDR1-241ENST00000460944 FPGSQ05932 587 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 ORC2Q13416 577 aaPredicted RBP20.75■□□□□ 0.91
DDR1-241ENST00000460944 MFSD5Q6N075 450 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 PDXDC2PQ6P474 469 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 CKAP2LQ8IYA6 745 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 RETREG2Q8NC44 543 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 CAGE1Q8TC20 777 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 ATP6V0A1Q93050 837 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
DDR1-241ENST00000460944 SETD4Q9NVD3 440 aa20.75■□□□□ 0.91
DDR1-241ENST00000460944 TRIOBPQ9H2D6 2365 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 ITGB8P26012 769 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 CYP2C18P33260 490 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 MCM7P33993 719 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 PTK7Q13308 1070 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 TTC38Q5R3I4 469 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 GABBR1Q9UBS5 961 aa20.74■□□□□ 0.91
DDR1-241ENST00000460944 POTEB3A0JP26 581 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 RRN3P2A6NIE6 340 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 PITPNM1O00562 1244 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 HOXC8P31273 242 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 BMP8BP34820 402 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 ZNF200P98182 395 aaPredicted RBP20.73■□□□□ 0.91
DDR1-241ENST00000460944 PPP2R5CQ13362 524 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■□□ 16.6
DDR1-241ENST00000460944 PLCB4Q15147 1175 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 GRIK4Q16099 956 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 POTEBQ6S5H4 581 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 LMBR1Q8WVP7 490 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 HAS1Q92839 578 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 FOXD4L1Q9NU39 408 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 COLQQ9Y215 455 aaPredicted RBP20.73■□□□□ 0.91
DDR1-241ENST00000460944 IGSF9BQ9UPX0 1349 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 TANC1Q9C0D5 1861 aa20.73■□□□□ 0.91
DDR1-241ENST00000460944 VPS37CA5D8V6 355 aaPredicted RBP20.72■□□□□ 0.91
DDR1-241ENST00000460944 WNT7AO00755 349 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 TREHO43280 583 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 HBP1O60381 514 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 CCL23P55773 120 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 SERINC5Q86VE9 423 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 ATP8B4Q8TF62 1192 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 FAM167AQ96KS9 214 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 CTAGE1Q96RT6 745 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 VAV3Q9UKW4 847 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 MAFBQ9Y5Q3 323 aaPredicted RBP20.72■□□□□ 0.91
DDR1-241ENST00000460944 UMODL1Q5DID0 1318 aa20.72■□□□□ 0.91
DDR1-241ENST00000460944 INSRRP14616 1297 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 IGBP1P78318 339 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 HIC1Q14526 733 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 ZNF174Q15697 407 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 NCAPH2Q6IBW4 605 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 B3GNT9Q6UX72 402 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
DDR1-241ENST00000460944 TUBE1Q9UJT0 475 aa20.71■□□□□ 0.91
DDR1-241ENST00000460944 TXKP42681 527 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 RBL2Q08999 1139 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 RILPL1Q5EBL4 403 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 TAF2Q6P1X5 1199 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 BBXQ8WY36 941 aaPredicted RBP20.7■□□□□ 0.9
DDR1-241ENST00000460944 WNT8AQ9H1J5 351 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 PRO3102Q9H379 93 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 TTC12Q9H892 705 aaPredicted RBP20.7■□□□□ 0.9
DDR1-241ENST00000460944 PCDHA12Q9UN75 941 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 COL1A2P08123 1366 aa20.7■□□□□ 0.9
DDR1-241ENST00000460944 A0A1W2PPC1 479 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 DKC1O60832 514 aaKnown RBP eCLIP20.69■□□□□ 0.9
DDR1-241ENST00000460944 OR52Z1P0C646 297 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 CSF2RAP15509 400 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 SELPP16109 830 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 ADAM17P78536 824 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 SCLYQ96I15 445 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 MTMR9Q96QG7 549 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 TMEM60Q9H2L4 133 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 CEP131Q9UPN4 1083 aa20.69■□□□□ 0.9
DDR1-241ENST00000460944 SCN5AQ14524 2016 aa20.68■□□□□ 0.9
DDR1-241ENST00000460944 EML1O00423 815 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms