RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 CCDC69A6NI79 296 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 RRN3P2A6NIE6 340 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CALM1P0DP23 149 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CALM2P0DP24 149 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CALM3P0DP25 149 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 INSRRP14616 1297 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 MARK3P27448 753 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 NFXL1Q6ZNB6 911 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CRIPAKQ8N1N5 446 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CCDC82Q8N4S0 544 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 PCYT2Q99447 389 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 AGO3Q9H9G7 860 aaKnown RBP14.15□□□□□ -0.14
GPNMB-204ENST00000459927 RC3H2Q9HBD1 1191 aaKnown RBP14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CLDND1Q9NY35 253 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 PRKAG3Q9UGI9 489 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 FAM50BQ9Y247 325 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 RWDD3Q9Y3V2 267 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 CDY2AQ9Y6F7 541 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 SQORQ9Y6N5 450 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 TTC3P53804 2025 aa14.15□□□□□ -0.14
GPNMB-204ENST00000459927 hCG_1642624A0A1W2PR95 340 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 SH2B2O14492 632 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-204ENST00000459927 RXRAP19793 462 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 CTNNB1P35222 781 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 MTMR1Q13613 665 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 CAMK1Q14012 370 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 BTG3Q14201 252 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-204ENST00000459927 UBE2SQ16763 222 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 IER5Q5VY09 327 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 C11orf84Q9BUA3 381 aaPredicted RBP14.14□□□□□ -0.15
GPNMB-204ENST00000459927 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
GPNMB-204ENST00000459927 SPDYE3A6NKU9 549 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 CD52P31358 61 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 IGBP1P78318 339 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 MRPS6P82932 125 aaKnown RBP14.13□□□□□ -0.15
GPNMB-204ENST00000459927 ZP2Q05996 745 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 DLX2Q07687 328 aaPredicted RBP14.13□□□□□ -0.15
GPNMB-204ENST00000459927 HYAL1Q12794 435 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 ADAM15Q13444 863 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 NECTIN1Q15223 517 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 TSHZ1Q6ZSZ6 1077 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 PLPPR4Q7Z2D5 763 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 TNPO1Q92973 898 aaKnown RBP14.13□□□□□ -0.15
GPNMB-204ENST00000459927 ZBTB10Q96DT7 871 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 LSG1Q9H089 658 aaKnown RBP14.13□□□□□ -0.15
GPNMB-204ENST00000459927 IGFLR1Q9H665 355 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
GPNMB-204ENST00000459927 KCNH7Q9NS40 1196 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 SLC12A7Q9Y666 1083 aa14.13□□□□□ -0.15
GPNMB-204ENST00000459927 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 SLC27A2O14975 620 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 DCXO43602 365 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 ATG7O95352 703 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 RPLP2P05387 115 aaKnown RBP14.12□□□□□ -0.15
GPNMB-204ENST00000459927 ARP10275 920 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 STAT5BP51692 787 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 PLCB4Q15147 1175 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 SMAD2Q15796 467 aaKnown RBP14.12□□□□□ -0.15
GPNMB-204ENST00000459927 NAALADL2Q58DX5 795 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 ADHFE1Q8IWW8 467 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 NME8Q8N427 588 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 SPPL3Q8TCT6 385 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 CELF4Q9BZC1 486 aaKnown RBP14.12□□□□□ -0.15
GPNMB-204ENST00000459927 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
GPNMB-204ENST00000459927 SLC9A2Q9UBY0 812 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 PADI3Q9ULW8 664 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
GPNMB-204ENST00000459927 MBTPS2O43462 519 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 GTF2F1P35269 517 aaKnown RBP eCLIP14.11□□□□□ -0.15
GPNMB-204ENST00000459927 CREB3L3Q68CJ9 461 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 TMTC3Q6ZXV5 915 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 RAB11FIP4Q86YS3 637 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 LINC01599Q8WXQ3 324 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 P2RX5Q93086 422 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 LRRC2Q9BYS8 371 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 FAM49AQ9H0Q0 323 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-204ENST00000459927 AZI2Q9H6S1 392 aa14.11□□□□□ -0.15
GPNMB-204ENST00000459927 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
GPNMB-204ENST00000459927 COL4A6Q14031 1691 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 MEIS1O00470 390 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 DNAJB1P25685 340 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 IRS1P35568 1242 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 ACTR2P61160 394 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 TMEM62Q0P6H9 643 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 CSPP1Q1MSJ5 1256 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 HEATR3Q7Z4Q2 680 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 SGMS1Q86VZ5 419 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 TRAPPC12Q8WVT3 735 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 RIC8AQ9NPQ8 531 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 TRPV2Q9Y5S1 764 aa14.1□□□□□ -0.15
GPNMB-204ENST00000459927 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms