RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PPP1R2P41236 205 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 AFMP43652 599 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 MDM2Q00987 491 aaPredicted RBP10.01□□□□□ -0.81
VPS50-207ENST00000458530 PLS1Q14651 629 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 TMEM132BQ14DG7 1078 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 NSMFQ6X4W1 530 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 SH3RF1Q7Z6J0 888 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 RIOX2Q8IUF8 465 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 NEK9Q8TD19 979 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 SYTL5Q8TDW5 730 aaPredicted RBP10.01□□□□□ -0.81
VPS50-207ENST00000458530 HAS1Q92839 578 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 GUCD1Q96NT3 240 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.01□□□□□ -0.81
VPS50-207ENST00000458530 CBX8Q9HC52 389 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 PCDHA5Q9Y5H7 936 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 MYH11P35749 1972 aa10.01□□□□□ -0.81
VPS50-207ENST00000458530 PLXNB2O15031 1838 aa10□□□□□ -0.81
VPS50-207ENST00000458530 PLXNA1Q9UIW2 1896 aa10□□□□□ -0.81
VPS50-207ENST00000458530 MUC3AQ02505 3323 aa10□□□□□ -0.81
VPS50-207ENST00000458530 IGLV3-22A0A075B6J6 115 aa10□□□□□ -0.81
VPS50-207ENST00000458530 A0A087X0B3 334 aa10□□□□□ -0.81
VPS50-207ENST00000458530 FAM86B1E9PN63 330 aa10□□□□□ -0.81
VPS50-207ENST00000458530 BIN1O00499 593 aa10□□□□□ -0.81
VPS50-207ENST00000458530 ARHGAP33O14559 1287 aa10□□□□□ -0.81
VPS50-207ENST00000458530 IKBKBO14920 756 aa10□□□□□ -0.81
VPS50-207ENST00000458530 GAS7O60861 476 aa10□□□□□ -0.81
VPS50-207ENST00000458530 FAM86B2P0C5J1 330 aa10□□□□□ -0.81
VPS50-207ENST00000458530 COL6A1P12109 1028 aa10□□□□□ -0.81
VPS50-207ENST00000458530 TAL1P17542 331 aaPredicted RBP10□□□□□ -0.81
VPS50-207ENST00000458530 MUTP22033 750 aa10□□□□□ -0.81
VPS50-207ENST00000458530 CCT6AP40227 531 aaKnown RBP10□□□□□ -0.81
VPS50-207ENST00000458530 RPS6P62753 249 aaKnown RBP10□□□□□ -0.81
VPS50-207ENST00000458530 STIM1Q13586 685 aa10□□□□□ -0.81
VPS50-207ENST00000458530 MUM1L1Q5H9M0 696 aa10□□□□□ -0.81
VPS50-207ENST00000458530 HYIQ5T013 277 aa10□□□□□ -0.81
VPS50-207ENST00000458530 TREML2Q5T2D2 321 aa10□□□□□ -0.81
VPS50-207ENST00000458530 MAP3K21Q5TCX8 1036 aa10□□□□□ -0.81
VPS50-207ENST00000458530 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
VPS50-207ENST00000458530 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
VPS50-207ENST00000458530 SV2BQ7L1I2 683 aa10□□□□□ -0.81
VPS50-207ENST00000458530 NLRX1Q86UT6 975 aa10□□□□□ -0.81
VPS50-207ENST00000458530 C7orf61Q8IZ16 206 aa10□□□□□ -0.81
VPS50-207ENST00000458530 DNERQ8NFT8 737 aa10□□□□□ -0.81
VPS50-207ENST00000458530 SPATA20Q8TB22 786 aa10□□□□□ -0.81
VPS50-207ENST00000458530 NSUN6Q8TEA1 469 aaKnown RBP10□□□□□ -0.81
VPS50-207ENST00000458530 LARP4BQ92615 738 aaKnown RBP10□□□□□ -0.81
VPS50-207ENST00000458530 RNF166Q96A37 237 aaPredicted RBP10□□□□□ -0.81
VPS50-207ENST00000458530 LENG9Q96B70 501 aa10□□□□□ -0.81
VPS50-207ENST00000458530 CDHR1Q96JP9 859 aa10□□□□□ -0.81
VPS50-207ENST00000458530 RMDN3Q96TC7 470 aa10□□□□□ -0.81
VPS50-207ENST00000458530 RIT2Q99578 217 aa10□□□□□ -0.81
VPS50-207ENST00000458530 MXRA8Q9BRK3 442 aa10□□□□□ -0.81
VPS50-207ENST00000458530 ZNF577Q9BSK1 485 aa10□□□□□ -0.81
VPS50-207ENST00000458530 TEKT3Q9BXF9 490 aa10□□□□□ -0.81
VPS50-207ENST00000458530 PXMP2Q9NR77 195 aa10□□□□□ -0.81
VPS50-207ENST00000458530 GJD2Q9UKL4 321 aa10□□□□□ -0.81
VPS50-207ENST00000458530 MAN1B1Q9UKM7 699 aa10□□□□□ -0.81
VPS50-207ENST00000458530 OGDHLQ9ULD0 1010 aa10□□□□□ -0.81
VPS50-207ENST00000458530 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
VPS50-207ENST00000458530 MYH9P35579 1960 aaKnown RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 PP2D1A8MPX8 630 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 MEIS1O00470 390 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 TNPO2O14787 897 aaKnown RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 MSH4O15457 936 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 MAFGO15525 162 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 EDIL3O43854 480 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 HMGCRP04035 888 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 SARSP49591 514 aaKnown RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 HERVK_113P62684 666 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 CCNA1P78396 465 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 DPYDQ12882 1025 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 PPP2R5CQ13362 524 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 MORC3Q14149 939 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 KCNB1Q14721 858 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 PGM5Q15124 567 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 FAM110CQ1W6H9 321 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 GNPTABQ3T906 1256 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 TMEM119Q4V9L6 283 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 NCAPH2Q6IBW4 605 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 SLC30A10Q6XR72 485 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 C11orf57Q6ZUT1 292 aaPredicted RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.99□□□□□ -0.81
VPS50-207ENST00000458530 SLC5A5Q92911 643 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 IWS1Q96ST2 819 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 P2RX7Q99572 595 aaKnown RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 PDCD2LQ9BRP1 358 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 SPATC1LQ9H0A9 340 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 TUFT1Q9NNX1 390 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 TBC1D22BQ9NU19 505 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 KBTBD4Q9NVX7 518 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 ADD3Q9UEY8 706 aaKnown RBP9.99□□□□□ -0.81
VPS50-207ENST00000458530 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
VPS50-207ENST00000458530 LAMA2P24043 3122 aaKnown RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 LOC102724159A0A0B4J2E5 919 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 RPN1P04843 607 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms