RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 SEZ6LQ9BYH1 1024 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
ATG4A-206ENST00000457035 TUT1Q9H6E5 874 aaKnown RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
ATG4A-206ENST00000457035 SNPHO15079 494 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 CD4P01730 458 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 PSEN2P49810 448 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 KRT76Q01546 638 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 TLE2Q04725 743 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 ZNF174Q15697 407 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 KIAA0753Q2KHM9 967 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 TRIM60Q495X7 471 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 UTP14CQ5TAP6 766 aaKnown RBP11.36□□□□□ -0.59
ATG4A-206ENST00000457035 LRCH2Q5VUJ6 765 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 NFRKBQ6P4R8 1299 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 C4orf32Q8N8J7 132 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 TMEM60Q9H2L4 133 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 MTMR6Q9Y217 621 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 TCHHQ07283 1943 aa11.36□□□□□ -0.59
ATG4A-206ENST00000457035 SZT2Q5T011 3432 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 SOX1O00570 391 aaPredicted RBP11.35□□□□□ -0.59
ATG4A-206ENST00000457035 STX6O43752 255 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 GAS7O60861 476 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 HSP90AA1P07900 732 aaKnown RBP11.35□□□□□ -0.59
ATG4A-206ENST00000457035 SYN1P17600 705 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 MCM7P33993 719 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 PTPN11Q06124 597 aaPredicted RBP11.35□□□□□ -0.59
ATG4A-206ENST00000457035 FAAP100Q0VG06 881 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 ORC2Q13416 577 aaPredicted RBP11.35□□□□□ -0.59
ATG4A-206ENST00000457035 NBR1Q14596 966 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 MFSD10Q14728 455 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 TTC38Q5R3I4 469 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 TRIM50Q86XT4 487 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
ATG4A-206ENST00000457035 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 TEKT3Q9BXF9 490 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 UNC45AQ9H3U1 944 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 RNPEPQ9H4A4 650 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 SMARCAD1Q9H4L7 1026 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 ATP11BQ9Y2G3 1177 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 PCDHB6Q9Y5E3 794 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 PCDHA10Q9Y5I2 948 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 EMSYQ7Z589 1322 aa11.35□□□□□ -0.59
ATG4A-206ENST00000457035 VPS37CA5D8V6 355 aaPredicted RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 DCDC2CA8MYV0 355 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 EML1O00423 815 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 NEMFO60524 1076 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 SUPT20HL2P0C7V6 817 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 ATP4AP20648 1035 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 STAT5BP51692 787 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 SPIRE1Q08AE8 756 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 PPP2R5CQ13362 524 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 HIC1Q14526 733 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 CALCRLQ16602 461 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 MIS18BP1Q6P0N0 1132 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 SH3RF1Q7Z6J0 888 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 FERMT3Q86UX7 667 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 CCDC60Q8IWA6 550 aaPredicted RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 SLFN12Q8IYM2 578 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 TET1Q8NFU7 2136 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 AFAP1L1Q8TED9 768 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 GLG1Q92896 1179 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 DISC1Q9NRI5 854 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 ERAP1Q9NZ08 941 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 GTF2IRD1Q9UHL9 959 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 NOL7Q9UMY1 257 aaKnown RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
ATG4A-206ENST00000457035 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
ATG4A-206ENST00000457035 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 WDR64B1ANS9 1081 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 MARCH6O60337 910 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 B4GALT4O60513 344 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 PSAPP07602 524 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 HOXC8P31273 242 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 SFNP31947 248 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 JAK3P52333 1124 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 CHMP4BP1P59074 171 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 ADAM17P78536 824 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 RESTQ13127 1097 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 PTGDRQ13258 359 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 BECN1Q14457 450 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 PLCB4Q15147 1175 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms