RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
COL8A1-203ENST00000452013 POTEB3A0JP26 581 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 SLC37A4O43826 429 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 HBP1O60381 514 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 DKC1O60832 514 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 HSP90AA1P07900 732 aaKnown RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 MARK3P27448 753 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 FPGSQ05932 587 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PPFIA1Q13136 1202 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PPIGQ13427 754 aaKnown RBP eCLIP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 CALCRLQ16602 461 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 POTEBQ6S5H4 581 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 TRIM50Q86XT4 487 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PCYT2Q99447 389 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 NOC4LQ9BVI4 516 aaKnown RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 UNC45AQ9H3U1 944 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 GABBR1Q9UBS5 961 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 PCDHA12Q9UN75 941 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 TRPC6Q9Y210 931 aa10.01□□□□□ -0.81
COL8A1-203ENST00000452013 COLQQ9Y215 455 aaPredicted RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 MAFBQ9Y5Q3 323 aaPredicted RBP10.01□□□□□ -0.81
COL8A1-203ENST00000452013 SMCHD1A6NHR9 2005 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 A0A1W2PPC1 479 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 PITPNM1O00562 1244 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 CHMP2AO43633 222 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 NEMFO60524 1076 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 RPLP2P05387 115 aaKnown RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 INSRRP14616 1297 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 ITGB8P26012 769 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 CYP2C18P33260 490 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 MCM7P33993 719 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 RFC2P35250 354 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 DEKP35659 375 aaKnown RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 TXKP42681 527 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 CCL23P55773 120 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 ZNF200P98182 395 aaPredicted RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 PPP2R5CQ13362 524 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 PLCB4Q15147 1175 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 EPHA7Q15375 998 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 ZNF174Q15697 407 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 GRIK4Q16099 956 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 ZNF484Q5JVG2 852 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 TTC38Q5R3I4 469 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 RSPH3Q86UC2 560 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 CCDC60Q8IWA6 550 aaPredicted RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 ATP8B4Q8TF62 1192 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
COL8A1-203ENST00000452013 HAS1Q92839 578 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 FAM167AQ96KS9 214 aa10□□□□□ -0.81
COL8A1-203ENST00000452013 LRRC37A2A6NM11 1700 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 TREHO43280 583 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 CAND2O75155 1236 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 P4HBP07237 508 aaKnown RBP9.99□□□□□ -0.81
COL8A1-203ENST00000452013 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 SELPP16109 830 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 HOXC8P31273 242 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 IGBP1P78318 339 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 ADAM17P78536 824 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 RILPL1Q5EBL4 403 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 TAF2Q6P1X5 1199 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 B3GNT9Q6UX72 402 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 GJA10Q969M2 543 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 MTMR9Q96QG7 549 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 TTC12Q9H892 705 aaPredicted RBP9.99□□□□□ -0.81
COL8A1-203ENST00000452013 IL23AQ9NPF7 189 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 LCTP09848 1927 aa9.99□□□□□ -0.81
COL8A1-203ENST00000452013 KIAA0100Q14667 2235 aaKnown RBP9.98□□□□□ -0.81
COL8A1-203ENST00000452013 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 MAGEB2O15479 319 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 FGBP02675 491 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 PFKMP08237 780 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 CKBP12277 381 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 CSF2RAP15509 400 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 THPOP40225 353 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 QARSP47897 775 aaKnown RBP9.98□□□□□ -0.81
COL8A1-203ENST00000452013 PSMC5P62195 406 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 RBL2Q08999 1139 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 HIC1Q14526 733 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 NCAPH2Q6IBW4 605 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 BRAPQ7Z569 592 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 TDHQ8IZJ6 230 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 NME8Q8N427 588 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 MTIF3Q9H2K0 278 aaKnown RBP9.98□□□□□ -0.81
COL8A1-203ENST00000452013 PRO3102Q9H379 93 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 FOXD4L1Q9NU39 408 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 TUBE1Q9UJT0 475 aa9.98□□□□□ -0.81
COL8A1-203ENST00000452013 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms