RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	CBFA2T2	O43439	604 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	EIF4EBP3	O60516	100 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	DDAH1	O94760	285 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZNF202	O95125	648 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	B3GALT4	O96024	378 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	MMP1	P03956	469 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	UQCRH	P07919	91 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	HIBADH	P31937	336 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	USP5	P45974	858 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	NDUFA8	P51970	172 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	RPS8	P62241	208 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	GSTO1	P78417	241 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	PDE4B	Q07343	736 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	NTRK3	Q16288	839 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ECM1	Q16610	540 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	SPRED3	Q2MJR0	410 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCDC178	Q5BJE1	867 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	OTUD7B	Q6GQQ9	843 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	OLFM4	Q6UX06	510 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	DYM	Q7RTS9	669 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCDC186	Q7Z3E2	898 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	FBXO33	Q7Z6M2	555 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	RAB11FIP4	Q86YS3	637 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	AMOTL1	Q8IY63	956 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZNF654	Q8IZM8	581 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	FANCB	Q8NB91	859 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	SPC24	Q8NBT2	197 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	LINC00116	Q8NCU8	138 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	MYRIP	Q8NFW9	859 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	RNF26	Q9BY78	433 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	TTC12	Q9H892	705 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	LIN7B	Q9HAP6	207 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	BRMS1	Q9HCU9	246 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ATP8A2	Q9NTI2	1148 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZSWIM5	Q9P217	1185 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	IMPACT	Q9P2X3	320 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	ABCF2	Q9UG63	623 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	MINPP1	Q9UNW1	487 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	TNKS	O95271	1327 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	C4A	P0C0L4	1744 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	C4B	P0C0L5	1744 aa		4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	COL5A3	P25940	1745 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-208	ENST00000447995	MINDY4B	A8MYZ0	360 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	KIF28P	B7ZC32	967 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	KIF2A	O00139	706 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	NPHP1	O15259	732 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	AP5Z1	O43299	807 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCP110	O43303	1012 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PRPF3	O43395	683 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PRKAB2	O43741	272 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	ORC4	O43929	436 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	RANBP6	O60518	1105 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	TUBB4A	P04350	444 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CYP11A1	P05108	521 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PTGS1	P23219	599 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	GYG1	P46976	350 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PTPA	Q15257	358 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZNF792	Q3KQV3	632 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	GLIPR1L2	Q4G1C9	344 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	SBK1	Q52WX2	424 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	IFIT1B	Q5T764	474 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	RESP18	Q5W5W9	173 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	GALNT12	Q8IXK2	581 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCDC144CP	Q8IYA2	1237 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	DIS3L2	Q8IYB7	885 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	FAM177A1	Q8N128	213 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	AOPEP	Q8N6M6	819 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	MIGA1	Q8NAN2	632 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCDC150	Q8NCX0	1101 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CTCFL	Q8NI51	663 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	NUP133	Q8WUM0	1156 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PHKB	Q93100	1093 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZNF830	Q96NB3	372 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	C8orf37	Q96NL8	207 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	MAP3K14	Q99558	947 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	PYM1	Q9BRP8	204 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	RIOK1	Q9BRS2	568 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	WDR18	Q9BV38	432 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	ZNF576	Q9H609	170 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	TUBE1	Q9UJT0	475 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	CCNL1	Q9UK58	526 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	HPSE	Q9Y251	543 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	SLC5A6	Q9Y289	635 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	SPATA31A6	Q5VVP1	1343 aa		4.62	□□□□□ -1.67
PTPN12-208	ENST00000447995	DUOX1	Q9NRD9	1551 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	TRIM75P	A6NK02	468 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	SNAP23	O00161	211 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	KCNQ2	O43526	872 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	FAM13A	O94988	1023 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	SMC2	O95347	1197 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	BAG3	O95817	575 aa		4.61	□□□□□ -1.67
PTPN12-208	ENST00000447995	LDHC	P07864	332 aa		4.61	□□□□□ -1.67

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