RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TAAR1Q96RJ0 339 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 AP5M1Q9H0R1 490 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
LINC00642-203ENST00000444942 RBM28Q9NW13 759 aaKnown RBP10.63□□□□□ -0.71
LINC00642-203ENST00000444942 INSL6Q9Y581 213 aa10.63□□□□□ -0.71
LINC00642-203ENST00000444942 ASPMQ8IZT6 3477 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 KIAA1217Q5T5P2 1943 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 PTGS1P23219 599 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 MCM4P33991 863 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 ALDH5A1P51649 535 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-203ENST00000444942 NUCB2P80303 420 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 BFSP2Q13515 415 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 GPNMBQ14956 572 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 FAM117BQ6P1L5 589 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 CNKSR3Q6P9H4 555 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00642-203ENST00000444942 HEATR3Q7Z4Q2 680 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 FCHSD1Q86WN1 690 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 FBXO16Q8IX29 292 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-203ENST00000444942 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-203ENST00000444942 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 COL20A1Q9P218 1284 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 PNMA2Q9UL42 364 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
LINC00642-203ENST00000444942 V9GY48 417 aaPredicted RBP10.62□□□□□ -0.71
LINC00642-203ENST00000444942 FANCMQ8IYD8 2048 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 ABHD14A-ACY1A0A1B0GW23 586 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 OPLAHO14841 1288 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 DYNC1LI2O43237 492 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 LMNAP02545 664 aaKnown RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 PTMSP20962 102 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 PDIA3P30101 505 aaKnown RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 AK2P54819 239 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 HTRA4P83105 476 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 PHKBQ93100 1093 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 TMX3Q96JJ7 454 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 MSLNLQ96KJ4 702 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 ADD3Q9UEY8 706 aaKnown RBP10.61□□□□□ -0.71
LINC00642-203ENST00000444942 DOCK5Q9H7D0 1870 aa10.61□□□□□ -0.71
LINC00642-203ENST00000444942 ASB14A6NK59 587 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 EFCAB14O75071 495 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 MYCLP12524 364 aaPredicted RBP10.6□□□□□ -0.71
LINC00642-203ENST00000444942 EIF2AK2P19525 551 aaKnown RBP10.6□□□□□ -0.71
LINC00642-203ENST00000444942 PDE4DQ08499 809 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 CUL4AQ13619 759 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 RSPO4Q2I0M5 234 aaPredicted RBP10.6□□□□□ -0.71
LINC00642-203ENST00000444942 TCTN1Q2MV58 587 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 TMEM63BQ5T3F8 832 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 KCNG4Q8TDN1 519 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
LINC00642-203ENST00000444942 CHAMP1Q96JM3 812 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 SLC26A6Q9BXS9 759 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 AGXT2Q9BYV1 514 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 Q9Y3F1 56 aa10.6□□□□□ -0.71
LINC00642-203ENST00000444942 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
LINC00642-203ENST00000444942 GCOM1H8Y6P7 765 aaPredicted RBP10.59□□□□□ -0.71
LINC00642-203ENST00000444942 LINC01565O15544 149 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 CXCL10P02778 98 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 POLR2MP0CAP2 368 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 SMPD1P17405 629 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 NAPAP54920 295 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 AKAP17AQ02040 695 aaKnown RBP10.59□□□□□ -0.71
LINC00642-203ENST00000444942 FUT2Q10981 343 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 ADAM15Q13444 863 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 UBE2SQ16763 222 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 KIAA0319Q5VV43 1072 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 USP17L6PQ6QN14 398 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 TMEM192Q8IY95 271 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 SMARCC2Q8TAQ2 1214 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 CUL5Q93034 780 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 INTS4Q96HW7 963 aaKnown RBP10.59□□□□□ -0.71
LINC00642-203ENST00000444942 RMDN3Q96TC7 470 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 PHF7Q9BWX1 381 aaPredicted RBP10.59□□□□□ -0.71
LINC00642-203ENST00000444942 TPCN1Q9ULQ1 816 aa10.59□□□□□ -0.71
LINC00642-203ENST00000444942 CCDC196A0A1B0GTZ2 297 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 GOLGA6L22H0YM25 854 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 CPLX1O14810 134 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 SORBS3O60504 671 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 LARGE1O95461 756 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 GTF2F1P35269 517 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00642-203ENST00000444942 HSD17B4P51659 736 aa10.58□□□□□ -0.72
LINC00642-203ENST00000444942 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
LINC00642-203ENST00000444942 COASYQ13057 564 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms