RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, humanhuman

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-208ENST00000444476 HRH3Q9Y5N1 445 aa12.73□□□□□ -0.37
LINC00475-208ENST00000444476 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 KRBA1A5PL33 1030 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 GOLGA8AA7E2F4 631 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 GOLGA8BA8MQT2 603 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 DNM1LO00429 736 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 BMP4P12644 408 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 CALML3P27482 149 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 HSD17B4P51659 736 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 EVCP57679 992 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 COL9A3Q14050 684 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-208ENST00000444476 SLC30A10Q6XR72 485 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
LINC00475-208ENST00000444476 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-208ENST00000444476 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
LINC00475-208ENST00000444476 BRF1Q92994 677 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 IWS1Q96ST2 819 aa12.72□□□□□ -0.37
LINC00475-208ENST00000444476 MKI67P46013 3256 aaKnown RBP12.72□□□□□ -0.37
LINC00475-208ENST00000444476 LCTP09848 1927 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
LINC00475-208ENST00000444476 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 AMPD1P23109 780 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 EDNRBP24530 442 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00475-208ENST00000444476 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 PRAMEF19Q5SWL8 479 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 RNF180Q86T96 592 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
LINC00475-208ENST00000444476 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
LINC00475-208ENST00000444476 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
LINC00475-208ENST00000444476 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 CFBP00751 764 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 TAL1P17542 331 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 RXRAP19793 462 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 IQSEC1Q6DN90 963 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 SLCO4C1Q6ZQN7 724 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 CUL5Q93034 780 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 RMDN3Q96TC7 470 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 GLT8D2Q9H1C3 349 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 C11orf49Q9H6J7 331 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 NAP1L2Q9ULW6 460 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-208ENST00000444476 Q9Y3F1 56 aa12.7□□□□□ -0.38
LINC00475-208ENST00000444476 ASTN1O14525 1302 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 PIK3CDO00329 1044 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 COL6A1P12109 1028 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 CPA1P15085 419 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 MSX1P28360 303 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 NKX3-2P78367 333 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 APOBRQ0VD83 1088 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 UBAP2LQ14157 1087 aaKnown RBP12.69□□□□□ -0.38
LINC00475-208ENST00000444476 RHBDD1Q8TEB9 315 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
LINC00475-208ENST00000444476 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
LINC00475-208ENST00000444476 LRRC37A2A6NM11 1700 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 OPLAHO14841 1288 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 STAM2O75886 525 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 TNFAIP2Q03169 654 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 USP4Q13107 963 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 STXBP2Q15833 593 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 ARHGEF16Q5VV41 709 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 CPLX2Q6PUV4 134 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 C1orf229Q6ZS94 237 aaPredicted RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 PCSK9Q8NBP7 692 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 UPF3BQ9BZI7 483 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 UPF3AQ9H1J1 476 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
LINC00475-208ENST00000444476 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
LINC00475-208ENST00000444476 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
LINC00475-208ENST00000444476 FGFR3P22607 806 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
LINC00475-208ENST00000444476 GJA9P57773 515 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
LINC00475-208ENST00000444476 TOB2Q14106 344 aaPredicted RBP12.67□□□□□ -0.38
LINC00475-208ENST00000444476 LRRC41Q15345 812 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 C8orf34Q49A92 452 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 TAPT1Q6NXT6 567 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 XRRA1Q6P2D8 792 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 KCNV1Q6PIU1 500 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 FIGNL1Q6PIW4 674 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 RAB11FIP4Q86YS3 637 aa12.67□□□□□ -0.38
LINC00475-208ENST00000444476 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms