RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 TMEM199Q8N511 208 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 CAGE1Q8TC20 777 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 ATP6V0A1Q93050 837 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 DISC1Q9NRI5 854 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 CEP290O15078 2479 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 CHMP2AO43633 222 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 DKC1O60832 514 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC6-211ENST00000443563 RPLP2P05387 115 aaKnown RBP12.21□□□□□ -0.45
HDAC6-211ENST00000443563 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 MARK3P27448 753 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 HOXC8P31273 242 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 BMP8BP34820 402 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 MAGEA10P43363 369 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 RILPL1Q5EBL4 403 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 TTC38Q5R3I4 469 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PDXDC2PQ6P474 469 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 CCDC60Q8IWA6 550 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-211ENST00000443563 CKAP2LQ8IYA6 745 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 BADQ92934 168 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 FAM167AQ96KS9 214 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PCYT2Q99447 389 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 UNC45AQ9H3U1 944 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 RNPEPQ9H4A4 650 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
HDAC6-211ENST00000443563 MAFBQ9Y5Q3 323 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-211ENST00000443563 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.46
HDAC6-211ENST00000443563 COL1A2P08123 1366 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 TRIP12Q14669 1992 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-211ENST00000443563 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 HBP1O60381 514 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 PARNO95453 639 aaKnown RBP12.2□□□□□ -0.46
HDAC6-211ENST00000443563 CYP2C9P11712 490 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 MCM7P33993 719 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 MDM2Q00987 491 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-211ENST00000443563 FPGSQ05932 587 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 PPIGQ13427 754 aaKnown RBP eCLIP12.2□□□□□ -0.461e-7■■■□□ 17.5
HDAC6-211ENST00000443563 PLCB4Q15147 1175 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 ATP8B4Q8TF62 1192 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 PPP1R13LQ8WUF5 828 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 HAS1Q92839 578 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 GDF15Q99988 308 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
HDAC6-211ENST00000443563 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 NRBP2Q9NSY0 501 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
HDAC6-211ENST00000443563 LAMA2P24043 3122 aaKnown RBP12.2□□□□□ -0.46
HDAC6-211ENST00000443563 IGSF9BQ9UPX0 1349 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 A0A1W2PPC1 479 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 VPS37CA5D8V6 355 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-211ENST00000443563 LAD1O00515 517 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 CAND2O75155 1236 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 RFC2P35250 354 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 RBL2Q08999 1139 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 BECN1Q14457 450 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 GRIK4Q16099 956 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 ZNF484Q5JVG2 852 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 TAF2Q6P1X5 1199 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
HDAC6-211ENST00000443563 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-211ENST00000443563 GJA10Q969M2 543 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 MTMR9Q96QG7 549 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 UBE2OQ9C0C9 1292 aaKnown RBP12.19□□□□□ -0.46
HDAC6-211ENST00000443563 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-211ENST00000443563 VAV3Q9UKW4 847 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 CEP131Q9UPN4 1083 aa12.19□□□□□ -0.46
HDAC6-211ENST00000443563 RANBP2P49792 3224 aaKnown RBP12.18□□□□□ -0.46
HDAC6-211ENST00000443563 TREHO43280 583 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
HDAC6-211ENST00000443563 OR52Z1P0C646 297 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 INSRRP14616 1297 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 SYT1P21579 422 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 CYP2C18P33260 490 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 TXKP42681 527 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 ADAM17P78536 824 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 EPHA7Q15375 998 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 ZNF174Q15697 407 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 NCAPH2Q6IBW4 605 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 LMBR1Q8WVP7 490 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
HDAC6-211ENST00000443563 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms