RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ERMNQ8TAM6 284 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 SH3TC2Q8TF17 1288 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TUFT1Q9NNX1 390 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 DACT1Q9NYF0 836 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 SAMM50Q9Y512 469 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 DOCK3Q8IZD9 2030 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 A6NJR5 290 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TULP1O00294 542 aaPredicted RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 ZBTB39O15060 712 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 ZNF862O60290 1169 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TRAK2O60296 914 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 DUSP11O75319 330 aaKnown RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 LGR5O75473 907 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 LYPLA2O95372 231 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 PSAPP07602 524 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 ATP4AP20648 1035 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 CNGA1P29973 690 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TCF7P36402 384 aaPredicted RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 QARSP47897 775 aaKnown RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 NKX3-2P78367 333 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 ZRSR1Q15695 479 aaKnown RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 RRAGBQ5VZM2 374 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 POTEGQ6S5H5 508 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 CCDC73Q6ZRK6 1079 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 BLOC1S4Q9NUP1 217 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 GABBR1Q9UBS5 961 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 TCEAL9Q9UHQ7 104 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
UBR3-205ENST00000439681 MYH15Q9Y2K3 1946 aa8.39□□□□□ -1.07
UBR3-205ENST00000439681 MGAMO43451 1857 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 PPFIA4O75335 1185 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 MBD3O95983 291 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 MUTP22033 750 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 TXLNAP40222 546 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 GJA9P57773 515 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 PSMC5P62195 406 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 HAUS3Q68CZ6 603 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 LHX8Q68G74 356 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 PDXDC2PQ6P474 469 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 TLK2Q86UE8 772 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 IQUBQ8NA54 791 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 DHX58Q96C10 678 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 CALML4Q96GE6 196 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 MTRQ99707 1265 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 LXNQ9BS40 222 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 UPF3AQ9H1J1 476 aaKnown RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 ZSWIM4Q9H7M6 989 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 DDX19AQ9NUU7 478 aaKnown RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 CCDC39Q9UFE4 941 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 MYADML2A6NDP7 307 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 E9PMD0 336 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 NOP56O00567 594 aaKnown RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 MMP3P08254 477 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 SLFN14P0C7P3 912 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 MDM2Q00987 491 aaPredicted RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 C4orf19Q8IY42 314 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 TIGD1Q96MW7 591 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 C16orf70Q9BSU1 422 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 NT5C3AQ9H0P0 336 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 AP5M1Q9H0R1 490 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 ZNF302Q9NR11 478 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 DDX20Q9UHI6 824 aaKnown RBP8.38□□□□□ -1.07
UBR3-205ENST00000439681 KDM3AQ9Y4C1 1321 aa8.38□□□□□ -1.07
UBR3-205ENST00000439681 HTTP42858 3142 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 BACH1O14867 736 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 ADAMTS4O75173 837 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PGK1P00558 417 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 RARBP10826 455 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 STAT6P42226 847 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 STAT5BP51692 787 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 BEX3Q00994 111 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PKN2Q16513 984 aaKnown RBP8.37□□□□□ -1.07
UBR3-205ENST00000439681 SKOR2Q2VWA4 1001 aaPredicted RBP8.37□□□□□ -1.07
UBR3-205ENST00000439681 FBXO46Q6PJ61 603 aaPredicted RBP8.37□□□□□ -1.07
UBR3-205ENST00000439681 PLPPR4Q7Z2D5 763 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 TRIM50Q86XT4 487 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 KLHDC9Q8NEP7 349 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PIGOQ8TEQ8 1089 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 RAD54LQ92698 747 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PAGE5Q96GU1 130 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PYM1Q9BRP8 204 aaKnown RBP8.37□□□□□ -1.07
UBR3-205ENST00000439681 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 USP25Q9UHP3 1055 aa8.37□□□□□ -1.07
UBR3-205ENST00000439681 PLXNA1Q9UIW2 1896 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms