RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
SEMA3F-206ENST00000434342 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 ANKRD33BA6NCL7 494 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 POTECB2RU33 542 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 NCK2O43639 380 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 SLC1A4P43007 532 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 GABPAQ06546 454 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 KIAA0825Q8IV33 1275 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 ZBTB5O15062 677 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
SEMA3F-206ENST00000434342 SHMT1P34896 483 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 FKBP3Q00688 224 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 GPBP1Q86WP2 473 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 KCNQ5Q9NR82 932 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 MEIS1O00470 390 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 TUBBP07437 444 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 EPS15P42566 896 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 POLR2FP61218 127 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 SF3A3Q12874 501 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 IFT88Q13099 833 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 NRAPQ86VF7 1730 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 WNK3Q9BYP7 1800 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 A0A1W2PQJ5 194 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 PRPF6O94906 941 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 TRAF1Q13077 416 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 TBC1D25Q3MII6 688 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 USH1GQ495M9 461 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 FIGNQ5HY92 759 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 CCDC114Q96M63 670 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 TSGA10Q9BZW7 698 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 LRRC27Q9C0I9 530 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 COA1Q9GZY4 146 aa13.4□□□□□ -0.26
SEMA3F-206ENST00000434342 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TAL1P17542 331 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 QRICH1Q2TAL8 776 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 PRR16Q569H4 304 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 CCDC70Q6NSX1 233 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 WDR93Q6P2C0 686 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 HDAC7Q8WUI4 952 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SLC40A1Q9NP59 571 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 OPLAHO14841 1288 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 ADRA2BP18089 450 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 DNAJC19Q96DA6 116 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TMX4Q9H1E5 349 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TRIM37O94972 964 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SNCBQ16143 134 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 POTEEQ6S8J3 1075 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 TNRC6CQ9HCJ0 1690 aaKnown RBP13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
SEMA3F-206ENST00000434342 ANO9A1A5B4 782 aa13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 NOVP48745 357 aa13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 PABPC4Q13310 644 aaKnown RBP eCLIP13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 TMEM119Q4V9L6 283 aa13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 KCTD16Q68DU8 428 aa13.38□□□□□ -0.27
SEMA3F-206ENST00000434342 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms