RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 MARK3P27448 753 aa16.14■□□□□ 0.17
LAMA4-208ENST00000431543 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
LAMA4-208ENST00000431543 PKP1Q13835 747 aa16.14■□□□□ 0.17
LAMA4-208ENST00000431543 NONOQ15233 471 aaKnown RBP eCLIP16.14■□□□□ 0.17
LAMA4-208ENST00000431543 INF2Q27J81 1249 aa16.14■□□□□ 0.17
LAMA4-208ENST00000431543 ATL3Q6DD88 541 aa16.14■□□□□ 0.17
LAMA4-208ENST00000431543 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.17
LAMA4-208ENST00000431543 ZNF577Q9BSK1 485 aa16.14■□□□□ 0.17
LAMA4-208ENST00000431543 FAM205CA6NFA0 338 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 MSH4O15457 936 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 TREHO43280 583 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 HOXC8P31273 242 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 RESTQ13127 1097 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 NR5A1Q13285 461 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.17
LAMA4-208ENST00000431543 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 TMEM240Q5SV17 173 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 GLG1Q92896 1179 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 NAP1L4Q99733 375 aaKnown RBP16.13■□□□□ 0.17
LAMA4-208ENST00000431543 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 CFAP45Q9UL16 551 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
LAMA4-208ENST00000431543 C17orf102A2RUQ5 167 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 LGR5O75473 907 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ATG7O95352 703 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 IQCF3P0C7M6 154 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 GPNMBQ14956 572 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 TRIM71Q2Q1W2 868 aaKnown RBP16.12■□□□□ 0.17
LAMA4-208ENST00000431543 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ABHD15Q6UXT9 468 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 PIK3AP1Q6ZUJ8 805 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ZBTB10Q96DT7 871 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 GBP4Q96PP9 640 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 SMARCAD1Q9H4L7 1026 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ZNF215Q9UL58 517 aaPredicted RBP16.12■□□□□ 0.17
LAMA4-208ENST00000431543 ZDHHC9Q9Y397 364 aa16.12■□□□□ 0.17
LAMA4-208ENST00000431543 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 CYP3A7-CYP3A51PA0A087WV96 503 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 PITPNM1O00562 1244 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 CKBP12277 381 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 CYP3A7P24462 503 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 ADAM17P78536 824 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 SETQ01105 290 aaPredicted RBP16.11■□□□□ 0.17
LAMA4-208ENST00000431543 PTK7Q13308 1070 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 LETM2Q2VYF4 491 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 TBC1D22BQ9NU19 505 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 ERAP1Q9NZ08 941 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
LAMA4-208ENST00000431543 IGKV6D-21A0A0A0MT36 114 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 STAT5BP51692 787 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 BFSP2Q13515 415 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 Q4G0T1 1027 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 SWSAP1Q6NVH7 229 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 TRAF7Q6Q0C0 670 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 LMBR1Q8WVP7 490 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 SLC5A5Q92911 643 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
LAMA4-208ENST00000431543 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
LAMA4-208ENST00000431543 MBOAT7Q96N66 472 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 EMSYQ7Z589 1322 aa16.1■□□□□ 0.17
LAMA4-208ENST00000431543 SLC37A4O43826 429 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 FGBP02675 491 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 SELPP16109 830 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 ATP4AP20648 1035 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 KRT85P78386 507 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 PLCB4Q15147 1175 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 MARCH8Q5T0T0 291 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 ZNF618Q5T7W0 954 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 CAGE1Q8TC20 777 aa16.09■□□□□ 0.17
LAMA4-208ENST00000431543 CXXC1Q9P0U4 656 aaPredicted RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 DDX25Q9UHL0 483 aaKnown RBP16.09■□□□□ 0.17
LAMA4-208ENST00000431543 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 WNT7AO00755 349 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 BACH1O14867 736 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 PSMD10O75832 226 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 BMP15O95972 392 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 INSRRP14616 1297 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 ATP2B1P20020 1258 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 THPOP40225 353 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 IGBP1P78318 339 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 RBL2Q08999 1139 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 PPFIA1Q13136 1202 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms