RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 C2orf69Q8N8R5 385 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 TBCKQ8TEA7 893 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 LARP4BQ92615 738 aaKnown RBP9.62□□□□□ -0.87
GABPB1-205ENST00000429662 ARMC5Q96C12 935 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 MMS19Q96T76 1030 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 FAM107BQ9H098 131 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 NDST4Q9H3R1 872 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 DEF6Q9H4E7 631 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 AGPAT5Q9NUQ2 364 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 FAM184BQ9ULE4 1060 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 SNX12Q9UMY4 172 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 SUGT1Q9Y2Z0 365 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 HYOU1Q9Y4L1 999 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
GABPB1-205ENST00000429662 PLIN4Q96Q06 1357 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 PITPNM2Q9BZ72 1349 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 KDM3AQ9Y4C1 1321 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 H0YGN5 161 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 OPA1O60313 960 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 IL1R1P14778 569 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 TECP42680 631 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 BTDP43251 543 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 NNTQ13423 1086 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 CCDC96Q2M329 555 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
GABPB1-205ENST00000429662 GBP6Q6ZN66 633 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 RAD54LQ92698 747 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 KCNK17Q96T54 332 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 IFIH1Q9BYX4 1025 aaKnown RBP9.61□□□□□ -0.87
GABPB1-205ENST00000429662 NT5C3AQ9H0P0 336 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 SEMA6BQ9H3T3 888 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 JADE2Q9NQC1 790 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 KCNQ5Q9NR82 932 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 HPCAL4Q9UM19 191 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 SIK3Q9Y2K2 1263 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 FAN1Q9Y2M0 1017 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 MYH13Q9UKX3 1938 aa9.61□□□□□ -0.87
GABPB1-205ENST00000429662 LRRIQ3A6PVS8 624 aaPredicted RBP9.6□□□□□ -0.87
GABPB1-205ENST00000429662 GOLGA8KD6RF30 607 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 ENC1O14682 589 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 AKR1B10O60218 316 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 TNNT3P45378 269 aaPredicted RBP9.6□□□□□ -0.87
GABPB1-205ENST00000429662 KIF11P52732 1056 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 MRPL12P52815 198 aaKnown RBP9.6□□□□□ -0.87
GABPB1-205ENST00000429662 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
GABPB1-205ENST00000429662 APBA1Q02410 837 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 GRB10Q13322 594 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 TMEM119Q4V9L6 283 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 HYIQ5T013 277 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 C10orf76Q5T2E6 689 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 ALS2CLQ60I27 953 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 EMBQ6PCB8 327 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 OTOP1Q7RTM1 612 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 TMC4Q7Z404 712 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 MAPKAPK5Q8IW41 473 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 KIAA0895Q8NCT3 520 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 NOX5Q96PH1 765 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 PLIN2Q99541 437 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 MMTAG2Q9BU76 263 aaKnown RBP9.6□□□□□ -0.87
GABPB1-205ENST00000429662 LACRTQ9GZZ8 138 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 BLOC1S4Q9NUP1 217 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 TRIM10Q9UDY6 481 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 HDAC9Q9UKV0 1011 aa9.6□□□□□ -0.87
GABPB1-205ENST00000429662 SSC5DA1L4H1 1573 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 ALPK3Q96L96 1907 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 GAKO14976 1311 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 PNMA6FA0A0J9YX94 578 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 GRID2IPA4D2P6 1211 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MYMKA6NI61 221 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
GABPB1-205ENST00000429662 RNF40O75150 1001 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 BBOX1O75936 387 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 SNHG28P0DPA3 235 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 FCER1AP12319 257 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 ANXA13P27216 316 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 TXKP42681 527 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MAGEA1P43355 309 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MARSP56192 900 aaKnown RBP9.59□□□□□ -0.87
GABPB1-205ENST00000429662 EHHADHQ08426 723 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 RAD51AP2Q09MP3 1159 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 SLC9C1Q4G0N8 1177 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 GPATCH4Q5T3I0 446 aaKnown RBP9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CCDC181Q5TID7 509 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 PDXDC1Q6P996 788 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CACNA2D4Q7Z3S7 1137 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 TXNRD3Q86VQ6 643 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CREG2Q8IUH2 290 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CCDC65Q8IXS2 484 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 AENQ8WTP8 325 aaKnown RBP9.59□□□□□ -0.87
GABPB1-205ENST00000429662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.59□□□□□ -0.878e-6■■■■□ 19.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms