RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ITGB3BPQ13352 177 aaPredicted RBP11.95□□□□□ -0.5
RFC1-203ENST00000418436 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 KRT40Q6A162 431 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 MOXD1Q6UVY6 613 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 PACS2Q86VP3 889 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 SESTD1Q86VW0 696 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 ANKK1Q8NFD2 765 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 TNFRSF25Q93038 417 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 LENG9Q96B70 501 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 MBOAT7Q96N66 472 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 C16orf70Q9BSU1 422 aa11.95□□□□□ -0.5
RFC1-203ENST00000418436 ZMYND8Q9ULU4 1186 aaPredicted RBP11.95□□□□□ -0.5
RFC1-203ENST00000418436 WDR81Q562E7 1941 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 GSTTP1A0A1W2PQM5 241 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 NOP56O00567 594 aaKnown RBP11.94□□□□□ -0.5
RFC1-203ENST00000418436 DHX15O43143 795 aaKnown RBP11.94□□□□□ -0.5
RFC1-203ENST00000418436 LGALS2P05162 132 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 ZNF286BP0CG31 522 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 SYN1P17600 705 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 KRT2P35908 639 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.5
RFC1-203ENST00000418436 SH3RF1Q7Z6J0 888 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
RFC1-203ENST00000418436 ZFRQ96KR1 1074 aaKnown RBP11.94□□□□□ -0.5
RFC1-203ENST00000418436 KATNAL1Q9BW62 490 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
RFC1-203ENST00000418436 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 CEP290O15078 2479 aa11.94□□□□□ -0.5
RFC1-203ENST00000418436 CCDC194A0A1B0GVG4 234 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 BTBD18B2RXH4 712 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
RFC1-203ENST00000418436 TLR3O15455 904 aaKnown RBP11.93□□□□□ -0.5
RFC1-203ENST00000418436 B4GALT4O60513 344 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 ATG7O95352 703 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 NR5A1Q13285 461 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 TRIM29Q14134 588 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 INF2Q27J81 1249 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 Q4G0T1 1027 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 PRR16Q569H4 304 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
RFC1-203ENST00000418436 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 SEPT1Q8WYJ6 367 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 GDF15Q99988 308 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 TRPV6Q9H1D0 765 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 BRMS1Q9HCU9 246 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 TMEM39AQ9NV64 488 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
RFC1-203ENST00000418436 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 H3BRB1 525 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 MSH4O15457 936 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 LGR5O75473 907 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 TDP2O95551 362 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 CCNE2O96020 404 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 ITGB8P26012 769 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 BMP8BP34820 402 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 TCF7P36402 384 aaPredicted RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 SP4Q02446 784 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 CUL4AQ13619 759 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 KIAA0753Q2KHM9 967 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 PPP4R3AQ6IN85 833 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 PIK3AP1Q6ZUJ8 805 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 FAM184AQ8NB25 1140 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 PPP1R13LQ8WUF5 828 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 SLC5A5Q92911 643 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 C8orf76Q96K31 380 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 ZNF577Q9BSK1 485 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 TUT1Q9H6E5 874 aaKnown RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 PRDM5Q9NQX1 630 aaPredicted RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 TBC1D22BQ9NU19 505 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
RFC1-203ENST00000418436 PRKAG2Q9UGJ0 569 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 GTF2IRD1Q9UHL9 959 aa11.92□□□□□ -0.5
RFC1-203ENST00000418436 EMSYQ7Z589 1322 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 TIMP1P01033 207 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 SUPT20HL2P0C7V6 817 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
RFC1-203ENST00000418436 HOXC8P31273 242 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 MAGEA10P43363 369 aaPredicted RBP11.91□□□□□ -0.5
RFC1-203ENST00000418436 ACTR2P61160 394 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 FAM47CQ5HY64 1035 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 ABHD15Q6UXT9 468 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 CTAGE1Q96RT6 745 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 PCYT2Q99447 389 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 RIT2Q99578 217 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
RFC1-203ENST00000418436 MYH9P35579 1960 aaKnown RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 RAG1P15918 1043 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 HIC1Q14526 733 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms