RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
SHMT2-202ENST00000414700 E9PMD0 336 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 GPR25O00155 361 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 RGS2P41220 211 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 FLT3LGP49771 235 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 PRKCZQ05513 592 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 CD99L2Q8TCZ2 262 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 TSC1Q92574 1164 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 PAGE5Q96GU1 130 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 CDK5RAP3Q96JB5 506 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 APBA2Q99767 749 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 SENP7Q9BQF6 1050 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 SLC5A4Q9NY91 659 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 SLC9A2Q9UBY0 812 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 NFASCO94856 1347 aa17.36■□□□□ 0.37
SHMT2-202ENST00000414700 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 ZBTB39O15060 712 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 FARP2O94887 1054 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 GGPS1O95749 300 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 TGFB3P10600 412 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 ADCYAP1R1P41586 468 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 DHX8Q14562 1220 aaKnown RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 EPHA7Q15375 998 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 UGCGQ16739 394 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 TPH2Q8IWU9 490 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 SYNGAP1Q96PV0 1343 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 MYH9P35579 1960 aaKnown RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 ADCY6O43306 1168 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 TXNP10599 105 aaKnown RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 KRT76Q01546 638 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 POSTNQ15063 836 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 POLR3CQ9BUI4 534 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-202ENST00000414700 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 VTA1Q9NP79 307 aa17.35■□□□□ 0.37
SHMT2-202ENST00000414700 ACTR2P61160 394 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 MCM6Q14566 821 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 ZNF746Q6NUN9 644 aaPredicted RBP17.34■□□□□ 0.37
SHMT2-202ENST00000414700 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 SCFD2Q8WU76 684 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 LXNQ9BS40 222 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 KBTBD4Q9NVX7 518 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 KDM3AQ9Y4C1 1321 aa17.34■□□□□ 0.37
SHMT2-202ENST00000414700 WDR64B1ANS9 1081 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 IGHA2P01877 340 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 HSDL1Q3SXM5 330 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 TAF3Q5VWG9 929 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.37
SHMT2-202ENST00000414700 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 ZNF296Q8WUU4 475 aaPredicted RBP17.33■□□□□ 0.37
SHMT2-202ENST00000414700 LARP4BQ92615 738 aaKnown RBP17.33■□□□□ 0.37
SHMT2-202ENST00000414700 RAD54LQ92698 747 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 PYM1Q9BRP8 204 aaKnown RBP17.33■□□□□ 0.37
SHMT2-202ENST00000414700 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 ABHD16BQ9H3Z7 469 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 KIAA1468Q9P260 1216 aa17.33■□□□□ 0.37
SHMT2-202ENST00000414700 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 CTAGE5O15320 804 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 CUL4BQ13620 913 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 NEDD9Q14511 834 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 CCDC60Q8IWA6 550 aaPredicted RBP17.33■□□□□ 0.36
SHMT2-202ENST00000414700 TRIB2Q92519 343 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 TUFT1Q9NNX1 390 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 PCDHA5Q9Y5H7 936 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 PCDHA10Q9Y5I2 948 aa17.33■□□□□ 0.36
SHMT2-202ENST00000414700 JAK3P52333 1124 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 KIF22Q14807 665 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 CELF3Q5SZQ8 465 aaKnown RBP17.32■□□□□ 0.36
SHMT2-202ENST00000414700 OLFML2BQ68BL8 750 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 ISM2Q6H9L7 571 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 METTL7BQ6UX53 244 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 ABHD15Q6UXT9 468 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 MSL3Q8N5Y2 521 aaKnown RBP17.32■□□□□ 0.36
SHMT2-202ENST00000414700 MLXIPQ9HAP2 919 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 TCEAL9Q9UHQ7 104 aa17.32■□□□□ 0.36
SHMT2-202ENST00000414700 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 TMEM150BA6NC51 233 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 BIN1O00499 593 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 SFNP31947 248 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 DPYDQ12882 1025 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 KCNV1Q6PIU1 500 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 ELOA2Q8IYF1 753 aaPredicted RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 FUCA2Q9BTY2 467 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 GSTTP1A0A1W2PQM5 241 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 ZNF865P0CJ78 1059 aaPredicted RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 XRCC5P13010 732 aaKnown RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 SMPD1P17405 629 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 TRIM32Q13049 653 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 SWSAP1Q6NVH7 229 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms