RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SEL1LQ9UBV2 794 aa18.73■□□□□ 0.59
PHRF1-202ENST00000413872 FCER1AP12319 257 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 GARSP41250 739 aaKnown RBP18.72■□□□□ 0.59
PHRF1-202ENST00000413872 EHHADHQ08426 723 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 SIX6OS1Q8N1H7 587 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 NSUN4Q96CB9 384 aaKnown RBP18.72■□□□□ 0.59
PHRF1-202ENST00000413872 SEPT10Q9P0V9 454 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 RNF40O75150 1001 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 CSF1RP07333 972 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 KRT10P13645 584 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 QRICH1Q2TAL8 776 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 RFX6Q8HWS3 928 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 ASB14A6NK59 587 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 SERPING1P05155 500 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 P4HBP07237 508 aaKnown RBP18.72■□□□□ 0.59
PHRF1-202ENST00000413872 USP11P51784 963 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 APBA1Q02410 837 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 TSGA10IPQ3SY00 556 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 VSIG1Q86XK7 387 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 STAT3P40763 770 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 FAM49AQ9H0Q0 323 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-202ENST00000413872 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
PHRF1-202ENST00000413872 MARK3P27448 753 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 STYK1Q6J9G0 422 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 LRRN2O75325 713 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 HHIPL2Q6UWX4 724 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 C10orf67Q8IYJ2 551 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
PHRF1-202ENST00000413872 LPAR1Q92633 364 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 SYNJ2BP-COX16A0A087WUM0 186 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 TROVE2P10155 538 aaKnown RBP eCLIP18.71■□□□□ 0.59
PHRF1-202ENST00000413872 ELF1P32519 619 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 DIP2AQ14689 1571 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 ANKRD20A3Q5VUR7 823 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 DSTYKQ6XUX3 929 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 PPP4R1Q8TF05 950 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 COX16Q9P0S2 106 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 JRKLQ9Y4A0 524 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 STX2P32856 288 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 RBL2Q08999 1139 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 MFSD14CQ5VZR4 134 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 PADI6Q6TGC4 694 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 C7orf31Q8N865 590 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 MMP19Q99542 508 aa18.71■□□□□ 0.59
PHRF1-202ENST00000413872 CPSF3Q9UKF6 684 aaKnown RBP18.71■□□□□ 0.59
PHRF1-202ENST00000413872 FAM196BA6NMK8 535 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 QARSP47897 775 aaKnown RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 SPDYE2Q495Y8 402 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF667Q5HYK9 610 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 USP17L6PQ6QN14 398 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 C11orf57Q6ZUT1 292 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 XPAP23025 273 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 VPS41P49754 854 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 CLDN3O15551 220 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 CHRNA5P30532 468 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 KAZNQ674X7 775 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 ANKRD13CQ8N6S4 541 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF302Q9NR11 478 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
PHRF1-202ENST00000413872 CCHCR1Q8TD31 782 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 FAM114A2Q9NRY5 505 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 DONSONQ9NYP3 566 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 CDC23Q9UJX2 597 aa18.7■□□□□ 0.58
PHRF1-202ENST00000413872 C19orf81C9J6K1 198 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 PPP2R5CQ13362 524 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 ADGRF4Q8IZF3 695 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 GCNAQ96QF7 691 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 LCMT1Q9UIC8 334 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 DAGLAQ9Y4D2 1042 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 KDM6AO15550 1401 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 GFPT2O94808 682 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 RNF139Q8WU17 664 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 MAGOHBQ96A72 148 aaKnown RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 GOLGA8SH3BPF8 625 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 NFX1Q12986 1120 aaKnown RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 GKAP1Q5VSY0 366 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 XXYLT1Q8NBI6 393 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 SPZ1Q9BXG8 430 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 OSTNP61366 133 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 TKFCQ3LXA3 575 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 RAD54LQ92698 747 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 MCUR1Q96AQ8 359 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 CABS1Q96KC9 395 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 CACYBPQ9HB71 228 aaKnown RBP18.69■□□□□ 0.58
PHRF1-202ENST00000413872 SCINQ9Y6U3 715 aa18.69■□□□□ 0.58
PHRF1-202ENST00000413872 MCF2LO15068 1137 aa18.68■□□□□ 0.58
PHRF1-202ENST00000413872 ZNF500O60304 480 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms