RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MAP7Q14244 749 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 PTGISQ16647 500 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 OR2W6PQ8NHA6 318 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 MTA3Q9BTC8 594 aa15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 DDX47Q9H0S4 455 aaKnown RBP15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■■□□ 18.2
RPRD1A-202ENST00000399022 DMGDHQ9UI17 866 aaKnown RBP15.85■□□□□ 0.13
RPRD1A-202ENST00000399022 GFPT1Q06210 699 aaPredicted RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 ZNF449Q6P9G9 518 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 CUEDC2Q9H467 287 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 PTPN22Q9Y2R2 807 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 ANKRD26Q9UPS8 1709 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 RASGRF2O14827 1237 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 EIF3BP55884 814 aaKnown RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 BATF3Q9NR55 127 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 SLIT1O75093 1534 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 ERVK-24P63145 666 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 PHLDB2Q86SQ0 1253 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 SCYL3Q8IZE3 742 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 P3H4Q92791 437 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 SEC16BQ96JE7 1060 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 ZMYND12Q9H0C1 365 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 THAP12O43422 761 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 PDE6CP51160 858 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 SMTNP53814 917 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 CRYMQ14894 314 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 TBC1D10BQ4KMP7 808 aaPredicted RBP15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 CAPN12Q6ZSI9 719 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 RAB3IL1Q8TBN0 382 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 MYCBPAPQ8TBZ2 947 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 FBXL5Q9UKA1 691 aa15.84■□□□□ 0.13
RPRD1A-202ENST00000399022 RCAN1P53805 252 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 NFIXQ14938 502 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 CLEC10AQ8IUN9 316 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 VCX3BQ9H321 246 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 MLXIPLQ9NP71 852 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 CAPN11Q9UMQ6 739 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 GJA3Q9Y6H8 435 aa15.83■□□□□ 0.13
RPRD1A-202ENST00000399022 ARHGAP23Q9P227 1491 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 LRRC53A6NM62 1247 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 TROVE2P10155 538 aaKnown RBP eCLIP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 PAX7P23759 505 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 PBKQ96KB5 322 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 DDX23Q9BUQ8 820 aaKnown RBP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 AGXT2Q9BYV1 514 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 RBM12Q9NTZ6 932 aaKnown RBP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 NR2F2P24468 414 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 PTPAQ15257 358 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 USP37Q86T82 979 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 LINC00116Q8NCU8 138 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 CFAP61Q8NHU2 1237 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 AMNQ9BXJ7 453 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 QTRT2Q9H974 415 aaKnown RBP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 EHD2Q9NZN4 543 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 LIMA1Q9UHB6 759 aaKnown RBP15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 TBK1Q9UHD2 729 aa15.83■□□□□ 0.12
RPRD1A-202ENST00000399022 KRT5P13647 590 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 TRAPPC11Q7Z392 1133 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 HPS3Q969F9 1004 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 PHF20Q9BVI0 1012 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 SH2D4AQ9H788 454 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 GAS8O95995 478 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 RANBP1P43487 201 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 FKBP3Q00688 224 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 SF3B3Q15393 1217 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 C12orf60Q5U649 245 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 RNF168Q8IYW5 571 aaPredicted RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 GBP7Q8N8V2 638 aaPredicted RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 VCX3AQ9NNX9 186 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 ORC4O43929 436 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 SKIP12755 728 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 INTS5Q6P9B9 1019 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 RUNDC3BQ96NL0 473 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 CSRNP1Q96S65 589 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 OSBPL1AQ9BXW6 950 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 MST1RQ04912 1400 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 STAMBPO95630 424 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 PDHBP11177 359 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 PRKG1Q13976 671 aa15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
RPRD1A-202ENST00000399022 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms