RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CROCCP2Q86T23 111 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 EPHB6O15197 1021 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PRLRP16471 622 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GCKP35557 465 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GTF2IP78347 998 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 EVX2Q03828 476 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PPP2R5EQ16537 467 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PARP9Q8IXQ6 854 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP38Q8NB14 1042 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KLHL29Q96CT2 875 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 EDEM3Q9BZQ6 932 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CNOT10Q9H9A5 744 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ATP5DP30049 168 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FIGNQ5HY92 759 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CNBD1Q8NA66 436 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ANKS1AQ92625 1134 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GGA1Q9UJY5 639 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DDX39AO00148 427 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BCRP11274 1271 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NAB2Q15742 525 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 C10orf76Q5T2E6 689 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TRIM68Q6AZZ1 485 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZNF365Q70YC5 407 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM186BQ8IYM0 893 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TRIM51Q9BSJ1 452 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GGT7Q9UJ14 662 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KLRK1P26718 216 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 HSD17B3P37058 310 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SLC40A1Q9NP59 571 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PARP2Q9UGN5 583 aa12.09□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KRT5P13647 590 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SLC9A1P19634 815 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 LMNB1P20700 586 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RASGRF2O14827 1237 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CFBP00751 764 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 EIF3BP55884 814 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 FAM178BQ8IXR5 827 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SEC16BQ96JE7 1060 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 BHMT2Q9H2M3 363 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 KLHL14Q9P2G3 628 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PNMA2Q9UL42 364 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 POTEFA5A3E0 1075 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 STAT3P40763 770 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CDK17Q00537 523 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SNX1Q13596 522 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CHMP6Q96FZ7 201 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TBK1Q9UHD2 729 aa12.08□□□□□ -0.48
CSGALNACT1-202ENST00000397998 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ARHGEF35A5YM69 484 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 KLRC4O43908 158 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SUN1O94901 812 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PTK2Q05397 1052 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MYO1EQ12965 1108 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SEPT2Q15019 361 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NUGGCQ68CJ6 796 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CAPN12Q6ZSI9 719 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 AZI2Q9H6S1 392 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RABGAP1Q9Y3P9 1069 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms