RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 NOC4LQ9BVI4 516 aaKnown RBP28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 NOL7Q9UMY1 257 aaKnown RBP28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 TRPC6Q9Y210 931 aa28.64■■■□□ 2.18
TSPAN4-207ENST00000397411 TRIP12Q14669 1992 aaPredicted RBP28.64■■■□□ 2.17
TSPAN4-207ENST00000397411 DNAH12Q6ZR08 3092 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 SFNP31947 248 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 JAK3P52333 1124 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 MIER3Q7Z3K6 550 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 NOSTRINQ8IVI9 506 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 ETNPPLQ8TBG4 499 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 SNX21Q969T3 373 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 DISC1Q9NRI5 854 aa28.63■■■□□ 2.17
TSPAN4-207ENST00000397411 PSMD10O75832 226 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 BMP8BP34820 402 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 SLC26A2P50443 739 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 CCL23P55773 120 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 PPFIA1Q13136 1202 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 POTEDQ86YR6 584 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 SLFN12Q8IYM2 578 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 UNC45AQ9H3U1 944 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 FOXD4L1Q9NU39 408 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 GABBR1Q9UBS5 961 aa28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 MYH9P35579 1960 aaKnown RBP28.62■■■□□ 2.17
TSPAN4-207ENST00000397411 TBX3O15119 743 aa28.61■■■□□ 2.17
TSPAN4-207ENST00000397411 PTK7Q13308 1070 aa28.61■■■□□ 2.17
TSPAN4-207ENST00000397411 PPIGQ13427 754 aaKnown RBP eCLIP28.61■■■□□ 2.173e-9■■■□□ 16.8
TSPAN4-207ENST00000397411 CALCRLQ16602 461 aa28.61■■■□□ 2.17
TSPAN4-207ENST00000397411 NRCAMQ92823 1304 aa28.61■■■□□ 2.17
TSPAN4-207ENST00000397411 LTBP2Q14767 1821 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 IGKV6D-21A0A0A0MT36 114 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 POTEB3A0JP26 581 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 MCM7P33993 719 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 IGBP1P78318 339 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 PLCB4Q15147 1175 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 POTEBQ6S5H4 581 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 CCDC60Q8IWA6 550 aaPredicted RBP28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 CAGE1Q8TC20 777 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 AFAP1L1Q8TED9 768 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 KCNMB3Q9NPA1 279 aa28.6■■■□□ 2.17
TSPAN4-207ENST00000397411 RRN3P2A6NIE6 340 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 KIF28PB7ZC32 967 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 TREHO43280 583 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 NEMFO60524 1076 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 HSP90AA1P07900 732 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 PDCP20941 246 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 U2AF2P26368 475 aaKnown RBP eCLIP28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 ZNF174Q15697 407 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 GRIK4Q16099 956 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 TRMT1LQ7Z2T5 733 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 RDM1Q8NG50 284 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 INTS4Q96HW7 963 aaKnown RBP28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 UMODL1Q5DID0 1318 aa28.59■■■□□ 2.17
TSPAN4-207ENST00000397411 INSRRP14616 1297 aa28.58■■■□□ 2.17
TSPAN4-207ENST00000397411 CSF2RAP15509 400 aa28.58■■■□□ 2.17
TSPAN4-207ENST00000397411 HIC1Q14526 733 aa28.58■■■□□ 2.17
TSPAN4-207ENST00000397411 TTC38Q5R3I4 469 aa28.58■■■□□ 2.17
TSPAN4-207ENST00000397411 LMBR1Q8WVP7 490 aa28.58■■■□□ 2.17
TSPAN4-207ENST00000397411 HBP1O60381 514 aa28.57■■■□□ 2.16
TSPAN4-207ENST00000397411 TRAPPC10P48553 1259 aa28.57■■■□□ 2.16
TSPAN4-207ENST00000397411 RPUSD2Q8IZ73 545 aaKnown RBP28.57■■■□□ 2.16
TSPAN4-207ENST00000397411 HAS1Q92839 578 aa28.57■■■□□ 2.16
TSPAN4-207ENST00000397411 SCLYQ96I15 445 aa28.57■■■□□ 2.16
TSPAN4-207ENST00000397411 PITPNM1O00562 1244 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 TXKP42681 527 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 SERINC5Q86VE9 423 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 ATP8B4Q8TF62 1192 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 CTAGE1Q96RT6 745 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 NRBP2Q9NSY0 501 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 PCDHA12Q9UN75 941 aa28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 MAFBQ9Y5Q3 323 aaPredicted RBP28.56■■■□□ 2.16
TSPAN4-207ENST00000397411 THPOP40225 353 aa28.55■■■□□ 2.16
TSPAN4-207ENST00000397411 PPP2R5CQ13362 524 aa28.55■■■□□ 2.16
TSPAN4-207ENST00000397411 NCAPH2Q6IBW4 605 aa28.55■■■□□ 2.16
TSPAN4-207ENST00000397411 WNT8AQ9H1J5 351 aa28.55■■■□□ 2.16
TSPAN4-207ENST00000397411 VPS37CA5D8V6 355 aaPredicted RBP28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 WNT7AO00755 349 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 IQCF3P0C7M6 154 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 CKBP12277 381 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 SELPP16109 830 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 HOXC8P31273 242 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 ORC2Q13416 577 aaPredicted RBP28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 ZNF484Q5JVG2 852 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 TDHQ8IZJ6 230 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 BBXQ8WY36 941 aaPredicted RBP28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 DHX38Q92620 1227 aaKnown RBP28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 FAM167AQ96KS9 214 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 PRO3102Q9H379 93 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 IL23AQ9NPF7 189 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 TUBE1Q9UJT0 475 aa28.54■■■□□ 2.16
TSPAN4-207ENST00000397411 WDR81Q562E7 1941 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 A0A1W2PPC1 479 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 ACRP10323 421 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 LRRC8DQ7L1W4 858 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 DEFB128Q7Z7B8 93 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 RSPH3Q86UC2 560 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 TTC12Q9H892 705 aaPredicted RBP28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 VAV3Q9UKW4 847 aa28.53■■■□□ 2.16
TSPAN4-207ENST00000397411 RFC2P35250 354 aa28.52■■■□□ 2.16
TSPAN4-207ENST00000397411 HABP4Q5JVS0 413 aaKnown RBP28.52■■■□□ 2.16
TSPAN4-207ENST00000397411 TAF2Q6P1X5 1199 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms