RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 UBA1P22314 1058 aaKnown RBP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 LBX1P52954 281 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 TERF1P54274 439 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 DPYDQ12882 1025 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 NEDD9Q14511 834 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 NOLC1Q14978 699 aaKnown RBP eCLIP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 SLAIN1Q8ND83 568 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 IMPACTQ9P2X3 320 aa16.67■□□□□ 0.26
CAPN3-207ENST00000397200 DDX41Q9UJV9 622 aaKnown RBP16.67■□□□□ 0.26
CAPN3-207ENST00000397200 NFASCO94856 1347 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
CAPN3-207ENST00000397200 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
CAPN3-207ENST00000397200 ARIH2O95376 493 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
CAPN3-207ENST00000397200 ADCYAP1R1P41586 468 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 SP2Q02086 613 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 IQSEC1Q6DN90 963 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 ISM2Q6H9L7 571 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 CCDC62Q6P9F0 684 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 GRAMD1CQ8IYS0 662 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 VAV3Q9UKW4 847 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 PTCH2Q9Y6C5 1203 aa16.66■□□□□ 0.26
CAPN3-207ENST00000397200 PDIA5Q14554 519 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 IQUBQ8NA54 791 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
CAPN3-207ENST00000397200 CACTINQ8WUQ7 758 aaKnown RBP16.65■□□□□ 0.26
CAPN3-207ENST00000397200 GSDMAQ96QA5 445 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 XPO4Q9C0E2 1151 aaKnown RBP16.65■□□□□ 0.26
CAPN3-207ENST00000397200 JPH1Q9HDC5 661 aaPredicted RBP16.65■□□□□ 0.26
CAPN3-207ENST00000397200 LRWD1Q9UFC0 647 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
CAPN3-207ENST00000397200 POTEMA6NI47 508 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 CHMP2AO43633 222 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 GGPS1O95749 300 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 CYBAP13498 195 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-207ENST00000397200 GRK4P32298 578 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 FANCCQ00597 558 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 KRT76Q01546 638 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-207ENST00000397200 TRIM32Q13049 653 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 NCAPH2Q6IBW4 605 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 AK8Q96MA6 479 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 UNC45AQ9H3U1 944 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 IFNKQ9P0W0 207 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 SLC9A2Q9UBY0 812 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 FAM184BQ9ULE4 1060 aa16.64■□□□□ 0.25
CAPN3-207ENST00000397200 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 NKRFO15226 690 aaKnown RBP eCLIP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 SORBS3O60504 671 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 ZNF18P17022 549 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 GSDMDP57764 484 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 TNFAIP2Q03169 654 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 LRMPQ12912 555 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 DUSP28Q4G0W2 176 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 CELF3Q5SZQ8 465 aaKnown RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 CTU1Q7Z7A3 348 aaKnown RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 LRRC8AQ8IWT6 810 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 GH1P01241 217 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 AKR1A1P14550 325 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 SMPD1P17405 629 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 TXLNAP40222 546 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 SP4Q02446 784 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 DHX8Q14562 1220 aaKnown RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 ZNF746Q6NUN9 644 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-207ENST00000397200 METTL7BQ6UX53 244 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 B3GNT9Q6UX72 402 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 MIER3Q7Z3K6 550 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 TRPV1Q8NER1 839 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 ERMNQ8TAM6 284 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 COPS5Q92905 334 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 BCAS3Q9H6U6 928 aa16.63■□□□□ 0.25
CAPN3-207ENST00000397200 PP2D1A8MPX8 630 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 WDR64B1ANS9 1081 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
CAPN3-207ENST00000397200 INHAP05111 366 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 ATP1A3P13637 1013 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 CNGA1P29973 690 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 SFNP31947 248 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 UBA7P41226 1012 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 JAK3P52333 1124 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 CUL4BQ13620 913 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 GJC2Q5T442 439 aaPredicted RBP16.62■□□□□ 0.25
CAPN3-207ENST00000397200 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
CAPN3-207ENST00000397200 SMAP1Q8IYB5 467 aaPredicted RBP16.62■□□□□ 0.25
CAPN3-207ENST00000397200 MED15Q96RN5 788 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms