RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 SCNN1DP51172 638 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 IKQ13123 557 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 KIFAP3Q92845 792 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 TNNI2P48788 182 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 RNF220Q5VTB9 566 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 LIN7AO14910 233 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZSCAN9O15535 394 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 GSTT1P30711 240 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 RFC1P35251 1148 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZBED6P86452 979 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 SCARF1Q14162 830 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 RASGRP2Q7LDG7 609 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ST13P4Q8IZP2 240 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ANKRD13CQ8N6S4 541 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 UHMK1Q8TAS1 419 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 USP6NLQ92738 828 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 NACA2Q9H009 215 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 CNOT10Q9H9A5 744 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 DMGDHQ9UI17 866 aaKnown RBP12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 CTNND2Q9UQB3 1225 aa12.32□□□□□ -0.44
RAPGEF3-202ENST00000395358 ZNF609O15014 1411 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 A0A1B0GVG6 124 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 ECE2O60344 883 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 IL25Q9H293 177 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 PCDHGA4Q9Y5G9 962 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 HNRNPRO43390 633 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 UBTFL6P0CB48 400 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 DMPKQ09013 629 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 XRCC4Q13426 336 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 CRY2Q49AN0 593 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 WDR60Q8WVS4 1066 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 TRIM47Q96LD4 638 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 BTAF1O14981 1849 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 MAP3K7O43318 606 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 BAG2O95816 211 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 XBP1P17861 261 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 ALG1Q9BT22 464 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
RAPGEF3-202ENST00000395358 THSD7AQ9UPZ6 1657 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 SPDYE5A6NIY4 337 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 GSTA2P09210 222 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 FGFR2P21802 821 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 BTDP43251 543 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TMEM67Q5HYA8 995 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 MTHFD1LQ6UB35 978 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 PHLDB2Q86SQ0 1253 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 NME8Q8N427 588 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 IFIH1Q9BYX4 1025 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 NVLO15381 856 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 COBLO75128 1261 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 STAT6P42226 847 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 BIRC3Q13489 604 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 SLC17A8Q8NDX2 589 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 SPATA4Q8NEY3 305 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 OR2W6PQ8NHA6 318 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 DRC3Q9H069 523 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 PFDN4Q9NQP4 134 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 MAPK8IP1Q9UQF2 711 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 C5P01031 1676 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 A0A1W2PRG0 241 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 PRDX5P30044 214 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 ALDH5A1P51649 535 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 KRI1Q8N9T8 703 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 PHC3Q8NDX5 983 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAPGEF3-202ENST00000395358 TMA7Q9Y2S6 64 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms