RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 TAF3Q5VWG9 929 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 SPICE1Q8N0Z3 855 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 SPATA4Q8NEY3 305 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 FAM71BQ8TC56 605 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 HDAC7Q8WUI4 952 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 HPCAL4Q9UM19 191 aa18.34■□□□□ 0.53
PRDM5-202ENST00000394435 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.53
PRDM5-202ENST00000394435 FOSP01100 380 aaPredicted RBP18.33■□□□□ 0.53
PRDM5-202ENST00000394435 HOXD13P35453 343 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.53
PRDM5-202ENST00000394435 ZNF572Q7Z3I7 529 aaPredicted RBP18.33■□□□□ 0.53
PRDM5-202ENST00000394435 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 LRRC1Q9BTT6 524 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.33■□□□□ 0.53
PRDM5-202ENST00000394435 TLR10Q9BXR5 811 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 GANQ9H2C0 597 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 VIPAS39Q9H9C1 493 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 PSD3Q9NYI0 1048 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.53
PRDM5-202ENST00000394435 A0A1W2PRG0 241 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 ACTN1P12814 892 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 MMP14P50281 582 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 AOC3Q16853 763 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 CCDC181Q5TID7 509 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 MCTP2Q6DN12 878 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 CCDC70Q6NSX1 233 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 FAM20AQ96MK3 541 aa18.33■□□□□ 0.52
PRDM5-202ENST00000394435 RSPH10B2B2RC85 870 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 RSPH10BP0C881 870 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 ZNF76P36508 570 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 VAV3Q9UKW4 847 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 ZNF646O15015 1829 aaPredicted RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 KLHL30Q0D2K2 578 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 ASIC2Q16515 512 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 SLC30A10Q6XR72 485 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 EPM2AIP1Q7L775 607 aaPredicted RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 SELENOOQ9BVL4 669 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 RUSC1Q9BVN2 902 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 BHMT2Q9H2M3 363 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 DMGDHQ9UI17 866 aaKnown RBP18.32■□□□□ 0.52
PRDM5-202ENST00000394435 SLX4Q8IY92 1834 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 ATAD5Q96QE3 1844 aa18.32■□□□□ 0.52
PRDM5-202ENST00000394435 A0A087X0T9 212 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 EML1O00423 815 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 FAM228BP0C875 321 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 SLC9A1P19634 815 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 CIITAP33076 1130 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 SLC7A5Q01650 507 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
PRDM5-202ENST00000394435 MED4Q9NPJ6 270 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 RGL1Q9NZL6 768 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 PRR12Q9ULL5 1215 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 TRAF3IP3Q9Y228 551 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 H0YIN7 160 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 SYF2O95926 243 aaKnown RBP18.31■□□□□ 0.52
PRDM5-202ENST00000394435 KLRC1P26715 233 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 CHRNA5P30532 468 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 ITIH3Q06033 890 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 SLC18A3Q16572 532 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 EIF2AK1Q9BQI3 630 aaKnown RBP18.31■□□□□ 0.52
PRDM5-202ENST00000394435 PACSIN1Q9BY11 444 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 AIPL1Q9NZN9 384 aa18.31■□□□□ 0.52
PRDM5-202ENST00000394435 ARMCX3Q9UH62 379 aaPredicted RBP18.31■□□□□ 0.52
PRDM5-202ENST00000394435 A0A0U1RQG5 324 aaPredicted RBP18.3■□□□□ 0.52
PRDM5-202ENST00000394435 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 PALMO75781 387 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 APBA3O96018 575 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 AARSP49588 968 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRDM5-202ENST00000394435 NAB2Q15742 525 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 BTNL9Q6UXG8 535 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 FRMD5Q7Z6J6 570 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 CSRNP1Q96S65 589 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 ADAMTS1Q9UHI8 967 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
PRDM5-202ENST00000394435 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
PRDM5-202ENST00000394435 ECE1P42892 770 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 DNA2P51530 1060 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 DPY19L2P1Q6NXN4 242 aa18.3■□□□□ 0.52
PRDM5-202ENST00000394435 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
PRDM5-202ENST00000394435 SFI1A8K8P3 1242 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 CALUO43852 315 aaPredicted RBP18.29■□□□□ 0.52
PRDM5-202ENST00000394435 RNF40O75150 1001 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 ENTPD3O75355 529 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 FTCDO95954 541 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
PRDM5-202ENST00000394435 KIAA1755Q5JYT7 1200 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 AENQ8WTP8 325 aaKnown RBP18.29■□□□□ 0.52
PRDM5-202ENST00000394435 RIN2Q8WYP3 895 aaPredicted RBP18.29■□□□□ 0.52
PRDM5-202ENST00000394435 RABGAP1Q9Y3P9 1069 aa18.29■□□□□ 0.52
PRDM5-202ENST00000394435 ATRNL1Q5VV63 1379 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms