RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 PA2G4Q9UQ80 394 aaKnown RBP8.96□□□□□ -0.97
LIMS1-203ENST00000393310 PSEN2P49810 448 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 FILIP1LQ4L180 1135 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 FAM47AQ5JRC9 791 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 CYP4A22Q5TCH4 519 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 FAM212AQ96EL1 285 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 EPSTI1Q96J88 318 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 UBE2ZQ9H832 354 aaPredicted RBP8.96□□□□□ -0.97
LIMS1-203ENST00000393310 PAK6Q9NQU5 681 aaPredicted RBP8.96□□□□□ -0.97
LIMS1-203ENST00000393310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.96□□□□□ -0.97
LIMS1-203ENST00000393310 GUCY2CP25092 1073 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 PLA2G5P39877 138 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 TXLNAP40222 546 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 INAVAQ3KP66 663 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 LBX2Q6XYB7 198 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 MAML3Q96JK9 1138 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 TRIM4Q9C037 500 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 TMA7Q9Y2S6 64 aaKnown RBP8.96□□□□□ -0.98
LIMS1-203ENST00000393310 PTPRZ1P23471 2315 aaPredicted RBP8.96□□□□□ -0.98
LIMS1-203ENST00000393310 AK9Q5TCS8 1911 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 PABPN1LA6NDY0 278 aaKnown RBP8.96□□□□□ -0.98
LIMS1-203ENST00000393310 TGFB3P10600 412 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 MAGEA9P43362 315 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 MKRN4PQ13434 485 aaPredicted RBP8.96□□□□□ -0.98
LIMS1-203ENST00000393310 MTERF2Q49AM1 385 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 RABEP2Q9H5N1 569 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 UBN1Q9NPG3 1134 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 RFX7Q2KHR2 1363 aa8.96□□□□□ -0.98
LIMS1-203ENST00000393310 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 PPFIA4O75335 1185 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 CYP2C9P11712 490 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 EZRP15311 586 aaKnown RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 SMPD1P17405 629 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NAPAP54920 295 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 MTMR3Q13615 1198 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NCOA7Q8NI08 942 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 TRIB2Q92519 343 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NSUN4Q96CB9 384 aaKnown RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 LRCH3Q96II8 777 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 CCND3P30281 292 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 CYP2C18P33260 490 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NFIAQ12857 509 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 GRB14Q14449 540 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 ZSCAN26Q16670 478 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 C11orf74Q86VG3 221 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 C1orf131Q8NDD1 294 aaKnown RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NAP1L3Q99457 506 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 EHD2Q9NZN4 543 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 RABL2AQ9UBK7 228 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 SHANK3Q9BYB0 1731 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 RAB27AP51159 221 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 CAP1Q01518 475 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 BIRC3Q13489 604 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NAA25Q14CX7 972 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 ELF2Q15723 593 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 Q7L0L9 218 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 SDCCAG8Q86SQ7 713 aaPredicted RBP8.95□□□□□ -0.98
LIMS1-203ENST00000393310 METTL23Q86XA0 190 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 TCP11Q8WWU5 503 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■■■■■ 50.8
LIMS1-203ENST00000393310 TBC1D31Q96DN5 1066 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 CERS4Q9HA82 394 aa8.95□□□□□ -0.98
LIMS1-203ENST00000393310 GFRA3O60609 400 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 MCM5P33992 734 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PSMD7P51665 324 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 UBE3AQ05086 875 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CATSPER4Q7RTX7 472 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CCDC150Q8NCX0 1101 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ARMC2Q8NEN0 867 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 POM121Q96HA1 1249 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CCDC114Q96M63 670 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ERAP1Q9NZ08 941 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 KIF20BQ96Q89 1820 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 KCNA2P16389 499 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 KLRC2P26717 231 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CLNS1AP54105 237 aaKnown RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CYP4A11Q02928 519 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 LRRC32Q14392 662 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 TWF2Q6IBS0 349 aaKnown RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
LIMS1-203ENST00000393310 HERC6Q8IVU3 1022 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PLVAPQ9BX97 442 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 RCAN3Q9UKA8 241 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 FZD1Q9UP38 647 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 IPPQ9Y573 584 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CASP8AP2Q9UKL3 1982 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 GAKO14976 1311 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 H0YCG3 227 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 ADH1AP07327 375 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 CTSHP09668 335 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 LMNB2Q03252 620 aa8.94□□□□□ -0.98
LIMS1-203ENST00000393310 PTK7Q13308 1070 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms